Gene VIBHAR_03008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03008 
Symbol 
ID5552821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp3026838 
End bp3027674 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content44% 
IMG OID640908490 
Producthypothetical protein 
Protein accessionYP_001446186 
Protein GI156975279 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCA TCAAAACTAT GCTAAATGGC AATCACTATC GCTACTCAAT GACTCTATGT 
GAGGGCTCAA CGCAGCACAT TATTTTTTTG CTAGGAGCCT TACAAGATAT CGAAAGCGTC
AGCTCCTTCT CCGCTCACTT TGCGACACAA ATGAACTGTA TTACTGTCGA AGTGCCAGGC
ACTGGGCATA CCGAAAATCT TGAGTCCACC ATCAGTATTC GAGATCAAGC GATAATGTTG
CATGATTTCA TTTGTTATTT AGGTATTGAT TCTGCCCACA TTATTGGTTT TTCTTATGCA
ACGGCAGTTG CTGTTGAGCT CTGTGATATC TGGCCTAATA TCCAATCGAT GTCTATTTGT
GGAGGAGTTC CAGGGATCCC TTCTTCAGGT CGGTTAGCCA CCAAGAAAAT GATTGCTGCC
GCCATGGAGA ACCCCGTAAG CTTTGCCAAA TCGTTTACTG AGTCTCTGAC CGTTGAGAAT
GAGTGTATAC CGAAAAACAA AGCCATAATA CGAGCGACCA TGCGTAATAT TAAGTCTATG
CCTCAAGAGC GTATCGATGT GTTTTTCGAA AACTCGATAC GACTTCTTGT TCATACACCA
AGTAATATTG AACATATATC CATTCCTTGC ACCATTTGCG TCGGTGAACT TGATCCCTAC
GTAACCAAAG AAACCGCCGA AAAATTTGCC AAGCAGCTAC GCAATAGCCA GCTAGTTGTT
ATACAAAATG CAGATCACCT CGTCCATTTG CAGTACCCAG AGAAAGTAGC CGCTGTAATG
CTAGCTCAAG CGCAAGCCCA ACAAAGCCTC CGCAACACTT TGCTCGCCAT AAGCTGA
 
Protein sequence
MDIIKTMLNG NHYRYSMTLC EGSTQHIIFL LGALQDIESV SSFSAHFATQ MNCITVEVPG 
TGHTENLEST ISIRDQAIML HDFICYLGID SAHIIGFSYA TAVAVELCDI WPNIQSMSIC
GGVPGIPSSG RLATKKMIAA AMENPVSFAK SFTESLTVEN ECIPKNKAII RATMRNIKSM
PQERIDVFFE NSIRLLVHTP SNIEHISIPC TICVGELDPY VTKETAEKFA KQLRNSQLVV
IQNADHLVHL QYPEKVAAVM LAQAQAQQSL RNTLLAIS