| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03006 |
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| Symbol | |
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| ID | 5553003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 3024775 |
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| End bp | 3026337 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640908488 |
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| Product | hypothetical protein |
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| Protein accession | YP_001446184 |
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| Protein GI | 156975277 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AATTGAATTT AAGACAACTA ATTCTGATTT TGAGTGTGTT TGGTGTGCTG
GCTACACTTC TAAACGCATT CTACTCTTTA TATCAAGTTC AGCATACGCT TTCTTGGAAC
AAAGCTATCG AGTCAAATCA TATGTATGCC GAGAAAATGG CTGAAATAAC AGATGCTTTT
ATAGAGTCTG CGATATCTCA ACTGGAATAC AGTGCAGTCA TACTGAGTCG TAACATGAAT
GATTTTGACA CTCTACAGCA AGAAGCAAAT AGACTGAAAA AACAAACCGA CTCTTTTAAC
TCGGTCGTCA TCGTGAATGC AAACGGTGTC ATCATATCTG TTGCTCCGGA AGCTATACAG
ATAAAAGGCT CTCAAATAGT AGGAGAAAAA AAACGACAGT CGCTGAATGC TAGAACTCCA
CTCGTAACTG ACCCTTTTGT TTCCGTCGCT GATAACTACT TAATTAGTAT TTCCTACCCT
ATCTTCTCAC CAAATAAAGA ATACTTAGGC TATGTCAGCG GTACCGTTTA TTTAAATCAG
CAAAACATAT TAACGAACAT CTTGGGCCAG CATAGTCACC AAGATGGGTC ATATCTTTAT
GTCGTTGATA AAAATAGAAC CTTGATTTAT CACCCTAATG AACAACGGAT AGGGGAAACC
ATTACCCACA ACTTAGCGAT AAATACGGTT GTTGAAGGAG AGTGTGGTGG GAAGGCGATA
GTAAACTCTC AAGGTGTTGA TATGCTTGCT GGTTATGCGC CGGTAAGTCT GACTGGTTGG
GGGATCATCG CTCAAAGGCC GGCAGAACTG ACGTTATCCG CACTTGCCAA TCAAATTCAG
AGCGTATTTA TTAAAACATT GCCCATTGTC GTTCTAACAC TTTTCGTTAT CTGGGTATCT
TCGTTCTTTA TCTCGAAACC GCTATGGCAG CTAGCCAGTG TAGTAAAAAA CTATGAAAAA
AACGCTTCAA CGGAACAAAG CTTACAGCAT GTGAAACCAT GGTACTTTGA AGCGTCACAC
CTAAAGCATT CACTGTTGGG CACATTTACG ACAATATCTG ACACAATCGA CCAACTCCAT
CTTGATACAT TAACCGATTC ATTGACTGGG CTTTTAAATC GTAGGGGGAT AGACAAAGCT
ATAGAGGACT TCCACTCACA GAGTATTCCT TTTTCCGTCC TTGCGTTGGA CATTGATTAT
TTCAAGCGAA TCAATGATAC CTATGGCCAC GATACTGGTG ATATATTGCT AGCACGACTA
GCGAAGTTGA TCAAAGCACA AGCGAGAGAT GTCGATACGG TTTGTCGATG TGGTGGAGAA
GAGTTCCTTG TGTTTTTAAG GAACACCAAT ATGTCTCAAG CCAAATGTAT TTCTGAACGA
ATTCGAAGAT CTGTTGAATC TCACGAGTAC GACGGTATTG GAAATGTAAC TATTTCTATT
GGAATCGCGC ATTGGGATGG CGAAGGGGAG CTGATAAATA GGGTGATTAA AAACGCCGAT
GACGCTCTTT ATCAAGCCAA AAGGAATGGT CGAAACAGAA CAGAGTTAAG CGGTTCTAAC
TGA
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| Protein sequence | MKEKLNLRQL ILILSVFGVL ATLLNAFYSL YQVQHTLSWN KAIESNHMYA EKMAEITDAF
IESAISQLEY SAVILSRNMN DFDTLQQEAN RLKKQTDSFN SVVIVNANGV IISVAPEAIQ
IKGSQIVGEK KRQSLNARTP LVTDPFVSVA DNYLISISYP IFSPNKEYLG YVSGTVYLNQ
QNILTNILGQ HSHQDGSYLY VVDKNRTLIY HPNEQRIGET ITHNLAINTV VEGECGGKAI
VNSQGVDMLA GYAPVSLTGW GIIAQRPAEL TLSALANQIQ SVFIKTLPIV VLTLFVIWVS
SFFISKPLWQ LASVVKNYEK NASTEQSLQH VKPWYFEASH LKHSLLGTFT TISDTIDQLH
LDTLTDSLTG LLNRRGIDKA IEDFHSQSIP FSVLALDIDY FKRINDTYGH DTGDILLARL
AKLIKAQARD VDTVCRCGGE EFLVFLRNTN MSQAKCISER IRRSVESHEY DGIGNVTISI
GIAHWDGEGE LINRVIKNAD DALYQAKRNG RNRTELSGSN
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