| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02836 |
|---|
| Symbol | |
|---|
| ID | 5553252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2856734 |
|---|
| End bp | 2857978 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640908318 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446016 |
|---|
| Protein GI | 156975109 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC TATTGCAGCA AACGTTATTG CAGCAAACGT TATTACAGCA AACATGGCAA
ACACTGATGG CGCATCGCAT GAAGAGCATG CTGGCCATCG TGGCTATTGC TTGGGGTGTG
ATTTCGGTTG TGGTGTTGAT TGCATTGGGT GAAGGTTTTT ATCGCCATCA AACTCAGCAG
TTGTCGTTTA TGGTCAACAA TGTGCAAGTC GCCTTTCCGT CGAGCACCAG CAAACCATGG
CATGGCTTAC CCCTGAGACG CGAGATCCAG ATTCCGCAGG ATAAGGTCGA TATGATCGAA
CAATCGGGTT TTGTGAAACA GGCATCCAGT GTTTATGCCA AGTGGGATGC GAACGTCACC
AATGAAAAAG GGCAGAACCT GACGAGCTTC GTCAGTGGCA TTGACTCCCA TTATTTCTCG
TTGATTCAAC GTAAGTTGGA GCAAGGTTCG CGTAACCTTT CACCCAGTGA TATTGCCAAC
CACACCCGTG TTGCGATTCT GGGGGATCAA GTTGCCAAGA TGGGGGGATT TCACGTTGGG
CAAACAGCCA ACGTCAATGG CATTCCATTT TTGGTGATCG GCATTATGAA AGACGAAGAT
GCGGGCATTT CATTTGGTGA TAGCCGTAAA GTCTTCATCC CTCATACCAC GTATCTTGAT
TTGTGGGATG CTAAACCTTG GATGCTGCTA CTCAAGCCTG TCGACGATAT GGATAGCAAT
GCATTCCGAC AAGCCATCGT TAACTTTTAT GCCAAACAAT TGCACTTTGA CCCGACTGAC
AAAGAAGCGA TTAACTTGCC AGGCTTTAGC GAGGGAGCGG CGGTAATTAC GGGCATTTTC
CGTGGCATTC AAATCTTTCT GGGGGCGAGC GGTGCGATGA CCATGGCTGT TGGCGCGCTT
GGTGTTGCGA ACATCATGTT CCTCTCTGTA ACAGAGCGAA CGCGAGAAAT CGGTGTGCGC
TTGGCGATTG GCGCAACGCA AAAATCCATA CTCAGCCAGT TTATCCTTGA AGGATTGTTA
TTGGTGGCCT TTGGTACCGC AGTTGGCTTA ATGGTGGCTT ACTTGGTGGT CGCACTGCTC
GGGTCTATGC ATTTGCCGGA TTGGTTAGGT TTTCCTGTGA TTACGCCGGA TTCCATTACT
TGGTCATTAT TGGTGACTCT CGTTCTGGCG CTGCTGGCGT CTTATTTTCC GGCAAGGCGA
GCATCGCGTC TTACCCCCGT AATAGCATTA ATTGCGAGGG CGTAA
|
|---|
| Protein sequence | MIRLLQQTLL QQTLLQQTWQ TLMAHRMKSM LAIVAIAWGV ISVVVLIALG EGFYRHQTQQ
LSFMVNNVQV AFPSSTSKPW HGLPLRREIQ IPQDKVDMIE QSGFVKQASS VYAKWDANVT
NEKGQNLTSF VSGIDSHYFS LIQRKLEQGS RNLSPSDIAN HTRVAILGDQ VAKMGGFHVG
QTANVNGIPF LVIGIMKDED AGISFGDSRK VFIPHTTYLD LWDAKPWMLL LKPVDDMDSN
AFRQAIVNFY AKQLHFDPTD KEAINLPGFS EGAAVITGIF RGIQIFLGAS GAMTMAVGAL
GVANIMFLSV TERTREIGVR LAIGATQKSI LSQFILEGLL LVAFGTAVGL MVAYLVVALL
GSMHLPDWLG FPVITPDSIT WSLLVTLVLA LLASYFPARR ASRLTPVIAL IARA
|
|---|
| |