Gene VIBHAR_02620 details

Gene Information

• Locus tag: VIBHAR_02620
• ID: 5554604
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 2633871
• End bp: 2635817
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640908105
• Product: hypothetical protein
• Protein accession: YP_001445808
• Protein GI: 156974901
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAGTT TGCGTAGCAT ACTGACTTTG ATTGTCGTTG CTGGCTCTCT TTTACCTGCC 
TATTGGGTTG GGATCAGCAT GATCGATAAG CACCAAGCAG ACCTCTTGGT GCAAAAAGAG 
ATCAAGTTAG AAAACACTAA TCAAGGTATT CAGAAAACCA TCAGTGAAGA TCTAACATTC 
ATTGCTAACT TAACTCGCTG GTATTCAAAG GATCGCCTGT TAGTACAAGG CATGGATAAC 
GTGCTTTATT CAAGTGTTAT CTGGCAAATG ATTGAGACCT TTGAAGGGCT TGCAACGAAC 
GTCAGTACGA CCTACATCAT TGATAAGAAT TGGCAGCCGA TGTACGAGAG TAACGGCTCT 
GTCTATCATC TAGAGAACAG CCGCCTTTTA ACCAAAATTA GAGCCGCAGA TACACTTTAT 
AAGCAAGGTA AGATGTACCA AACCACTTAC TTTGAGGAAG GTTTGGTTTA TAAAGGTGGA 
CAGAGTGGCA TTGCGATTGT TAGCCCACTT TTACCGTACA CTTTGTTACC TGGTTCAGAA 
TATGAGCCTC AAGGTTATCT GGTCGTGTTG GTGTCTTACC AAGATCTGAT CCAGATCTCT 
CAACCTTTTC TCTACAAGCA AGAATCGGTC AATTTTCACT ACGGCGATGT CAGCTTGACG 
AAAGGAGATG GCTCAAAGTT CATGAGCGAT ATCGTGGTTA CAAACCGGAA CTTTGTTGAG 
CCCCTAGAAA TCACAATGAT CCATTCGGTT TCTAACGCTG CTCGTGATCA AGAGTTGATG 
CAATCCAAGC AGCAGTTGTT AAACATTATT GTTGCAACGT TAGTAGTGAC GCTTGTTATC 
GCAATTTTGG CAAGTCGTTG GCTGACCCTA CCAATCCGAG AAATGACGAT GGTGGTTCGT 
AGTTTTAAAA ATAATAAGCG GCCAGATCTC ACACCTAAAC GCTTTCAATT CAAAGAGTTT 
AGGCAGCTTA TGAACCTTTT AGATTCACTG TGGGTTCAAT TGACGAATCA CATGGACGAG 
CTCGAGATTC GGAACCATGC GTTACGTAAA GCTAACCAAC AAGTTCAAGA TACCAATGCG 
CAGTTAGCGA ACTTTAACCA AGTTCTAGAA CACAGAGTAG AAGAGCAAAC GGCAGAATTG 
CGTGTGAACC TAACACGAGA GGAAGCGCAC AAAGCTAAGT TGATGACATT GATTAATTTC 
ACGACCAGTC ACGCTGGTGT TGGTTATCAC GCTATTCCAG AAGTGATTAA CTCGGGTTTG 
AATCGCTTGT TACCTCAGTC TGATATGCGT TTTAGCTTTA CGAAGCCCAA AGGCGAGAGA 
GTGAAAACCA TGCGTTCATC AACTGGCACT GTGGTGGGGT ATTTTGATTA CGGCACCTAT 
GCGTTAGATG AAGAAGAACG CATCTTACTT GAGCTATTCA AAAAGCAGTT GTACTCATGG 
TTAGAACTGG AAGATTTCGC GCGCAGAGAC AAGCTATCTA AGTGCCTAAA CCGTAAAGCG 
TTTGATGATG ATTATGAGTT CGCTCGCCAA TCGGTAGCGA AAGGTTGCTG GGACTCAATG 
GCAGTCATTA TCATCGATAT TAATGGGCTC AAAACGCTTA ATGATAATTA TGGACACGAT 
CGAGGCGACT TGCTGATTTC AAAATCTACG CAATTGATTA AGTCGATATT GCGAGATGAG 
TTGATGCTTT ATCGCATCGG TGGCGATGAG TTCGCGATCA TTGCACCTGA ACAAAGCCAG 
CAATCGCTGG AAGCATTGAT AAGCTCGCTA GAAGAAGCGC AAGAAGACAA ATGGATTGAT 
CTATCGGAGA ACAAGCGTCA TCCACTCAAG TTCTCTGTCG GTGGGGCATC GAGTGATAAT 
GTTTCACTAG ATAATCTATT TTCCATGGCA GACGAGGCTA TGTATGAGAA AAAACGAGCC 
TTCTATCAAC TCTCAGGCAA CGAATAA 

 

Protein sequence

MISLRSILTL IVVAGSLLPA YWVGISMIDK HQADLLVQKE IKLENTNQGI QKTISEDLTF 
IANLTRWYSK DRLLVQGMDN VLYSSVIWQM IETFEGLATN VSTTYIIDKN WQPMYESNGS 
VYHLENSRLL TKIRAADTLY KQGKMYQTTY FEEGLVYKGG QSGIAIVSPL LPYTLLPGSE 
YEPQGYLVVL VSYQDLIQIS QPFLYKQESV NFHYGDVSLT KGDGSKFMSD IVVTNRNFVE 
PLEITMIHSV SNAARDQELM QSKQQLLNII VATLVVTLVI AILASRWLTL PIREMTMVVR 
SFKNNKRPDL TPKRFQFKEF RQLMNLLDSL WVQLTNHMDE LEIRNHALRK ANQQVQDTNA 
QLANFNQVLE HRVEEQTAEL RVNLTREEAH KAKLMTLINF TTSHAGVGYH AIPEVINSGL 
NRLLPQSDMR FSFTKPKGER VKTMRSSTGT VVGYFDYGTY ALDEEERILL ELFKKQLYSW 
LELEDFARRD KLSKCLNRKA FDDDYEFARQ SVAKGCWDSM AVIIIDINGL KTLNDNYGHD 
RGDLLISKST QLIKSILRDE LMLYRIGGDE FAIIAPEQSQ QSLEALISSL EEAQEDKWID 
LSENKRHPLK FSVGGASSDN VSLDNLFSMA DEAMYEKKRA FYQLSGNE