| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02609 |
|---|
| Symbol | |
|---|
| ID | 5552815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2624609 |
|---|
| End bp | 2625940 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640908094 |
|---|
| Product | D-serine dehydratase |
|---|
| Protein accession | YP_001445797 |
|---|
| Protein GI | 156974890 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3048] D-serine dehydratase |
|---|
| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC ATAATATATG TGCGCTCATA ACCGAGTTCC CGTTAGTTAA ACGGCTGATC
GATTTAGAAG AAGTGGTTTG GTTCAACCCA AATATCACCA CACTTGAAGA AGGTCTACCG
TACGTTGGCT TGGGCGCTGC CAACATCAAA GACGCGAGTG AACGACTAAA ACGCTTTGCT
CCATACTTAA TGAAAGCCTT CCCAGAAACG GCGGCTTCTA ACGGAATTAT TGAATCGAAC
GTTGTTGAAA TCGACAAGAT GAAGTCCTGC TTGGAAGCGC AATACGGCAC TCAAATTCTT
GGACGTTTGA TGCTTAAAAA AGACAGTCAT CTGCCTATTT CAGGTTCAAT AAAGGCGCGT
GGTGGCATCT ATGAAGTGCT AACACACGCA GAGAGGTTGG CGATTGAAGC TGGGCTTCTA
AATGAAAGTG ATGACTACAG CAAATTGTTC AGTGAAGAGT TTCGTCAGTT CTTTCAGCAG
TACAGCATTG CCGTAAGTTC GACAGGGAAT CTCGGCATGT CTATCGGCAT CATGAGTGCA
AAACTCGGCT TCTCTGTATC GGTTCATATG TCATCGGATG CTCGAGAGTG GAAGAAAAAC
AAGCTGCGTT CTCACGGCGT AAACGTGGTG GAGTACGAGC AAGACTACGG TGTTGCTGTA
GAGCAGGGAC GCAAAGAAGC GGAAAAAGAT CCAACTTGCT TCTTTATTGA CGATGAAAAC
TCTCAGACCT TGTTCTTAGG TTATTCCGTT GCAGGTGAAC GCTTGAAGCA ACAATTTGAT
GATATGGGTA TCATTGTTGA CGCGGAGCAC CCTCTGTTTG TTTACCTACC TTGTGGTGTG
GGTGGTGGTC CTGGCGGTGT GGCGTTTGGC TTGAAGATGG CGTTTGGTGA CCACGTTCAT
TGTATCTTCG CGGAGCCGAC ACACTCTCCG TGTATGCTGC TTGGTGTACA CACTGGTTTG
CATGATGACA TCGCGGTGCA AGATCTTGGT ATTGACAACA TTACTGCAGC TGATGGTCTA
GCGGTAGGGC GTGCGTCTGG TTTTGTTGGG CGAGCAATGG AAAGACTTCT TGATGGTTAC
TACACCATCA CGGATGAGCG CATGTATCAT CATCTAGGTG AGCTAAGTGA ACAAGAAGAC
ATTCGTTTAG AGCCTTCTGC ACTGGCGGGC ATGATGGGGG CAGTGCACGT TTCACAAGAC
CAAGCTTACC AAGCTCGAAT GCAATTTAGT GAAGATAAGA TGAATAACGC CATTCACCTA
GTTTGGGCGA CGGGTGGCGG CATGGTGCCA GAGGCTGAAA TGTCGGCGTA CCTTGCGAAA
TCTGGTCGAT AA
|
|---|
| Protein sequence | MTTHNICALI TEFPLVKRLI DLEEVVWFNP NITTLEEGLP YVGLGAANIK DASERLKRFA
PYLMKAFPET AASNGIIESN VVEIDKMKSC LEAQYGTQIL GRLMLKKDSH LPISGSIKAR
GGIYEVLTHA ERLAIEAGLL NESDDYSKLF SEEFRQFFQQ YSIAVSSTGN LGMSIGIMSA
KLGFSVSVHM SSDAREWKKN KLRSHGVNVV EYEQDYGVAV EQGRKEAEKD PTCFFIDDEN
SQTLFLGYSV AGERLKQQFD DMGIIVDAEH PLFVYLPCGV GGGPGGVAFG LKMAFGDHVH
CIFAEPTHSP CMLLGVHTGL HDDIAVQDLG IDNITAADGL AVGRASGFVG RAMERLLDGY
YTITDERMYH HLGELSEQED IRLEPSALAG MMGAVHVSQD QAYQARMQFS EDKMNNAIHL
VWATGGGMVP EAEMSAYLAK SGR
|
|---|
| |