| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02383 |
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| Symbol | |
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| ID | 5556025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 2389597 |
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| End bp | 2391564 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640907869 |
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| Product | response regulator |
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| Protein accession | YP_001445572 |
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| Protein GI | 156974665 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACGC TGCTTTCTTT GCTTGCATCC CTATTTCTAG GCAGTCAAGC AAACGCAAGT
GACACTCAAA ATATCACGCA ATGGCATGCT GTCTATCAAG CAACGATGAA AACGAATTCA
AAGTCCGCGC TTAGTATGCT TCAAGATCGA TATCATACGG CAGACTCCAA TAGCGAAAAG
CTTTACGTCA GTGGATTGAT CTATGAGTAC ATGTCAAACA TCGACCAGCC CTACTATGGC
AGCAGCCAAA TCTTAGAGAA TAACTTTGCT AAGCTAGAGT CCAAATACAT CCTTGCGCTT
TCAGAAAGAA AAAGTGGCGA CTACGACACT TCCGTGGACA TCTTTACCTC ACTTTTGCAA
AGCGCTAAGC AACATAAAGA TGAAGAAACG AAAGCACTAT TGAACTATCA ACTGTGCTAC
ACCTTGAACC AGCAAGGACA ATACCACAAG GCAAACTTCT TTTGCTCTTC ATTGAACAAG
CACCTAAATC ACGACCATCA AGAGAGCATT CCTGCCGACC TAGCGTTACG CGTGATCGCT
AACAACTTTG ATTTTCGTGG TGAGTATGAG GTCGCTTTAC GTTTATACCG CCGTTTATTA
ACGGAAATGC CTCCTCAAAG CGATCCTACA AGTGTCTACA ACGATGTAGG AAACTTACTG
AGTGAGCTGG GCCAATACGA ACAGTCTGAA CAATATCTAA TACAAGCCCT ATTAGCTCGT
CAGTTAGATG CTCCACCTTT ACAAGTGGCA CAGGTCGAAC ACAGCTTGGC ATCAATGTAC
AGTCGATCTT CAAACTACGC AAAAGCAATC AGCCATTACA AAAATGCACT CACTTTACTT
GCTGAGATGG ATTATCCATA TGGTAAAGGC CTTACCTATC TTGGTCTCGG GTCTGCTTAT
GTAAATTCTG GAGACCTAAA AAGCGCAGTT CCGCATATTA AGAAGGCGCT AGAATTAGGC
GAAGAGTATG ACAACGAAAG ATTACAAACC GAAAGTCATC TTGCAGCTGG CTTTGCTAAC
TTAAAGCACA ACGTTTTAGA CAAAGCACTT CAACATGGCG AACTTGCTTT GGCACTCGCG
AATAAAAACG CAACGACCGC ACTACAAGCG AAAGCTCAGT TACTCTTGTC TCAGGCATAT
CAGAAACTAG ATGACAATTC CGCTGCCCTT TCTCATTACC AAGAGTACGC TAAATTAGAG
TTGGCGAACC GCGATGACAG CAATGTTAAA GCAATTGAAG CGTTGGATTT AACCAAGAGT
GAGTACGAAT ATGACTTGCA ACTCGTTAAG ATCGATAACG AGAGAAACCT AAAACTACTC
GAAATTGAGA AGCTTAGTGA ACAGCAACGT GCGTACAACT TCATTATTTT CTGCTTACTT
ACTGTGTTAC TCGTCGTACT GTTTGTACTG CGTAAAACAA AGATAAAATC TCGCTTAGAC
CGCCTAACTG GTTCATTAAA CCGCAGCACC ATTATTGAAA AAATAAGAGC TCAAACTGTC
AGTGCTCCAG AAGACATGCG ATATGTATTG GTATTGATAG ATTTGGATCA CTTTAAGTTG
ATTAACGATC AACACGGTCA CCCTACTGGG GACTTGGTGT TAAAACACGT ATGCAAAGCC
ATTCAAGCTA AGCTAAACAA AGGTGAGTAT ATTGGGCGTC TGGGAGGAGA AGAGTTTATC
TTGTTACTCA AGAATGTTGA TGAGATTGAT GTGCCATTCC GTATTCAAAG TTTGCATAAA
ACCATTTCAG AAGGACAGAT TAAGAGTGAA CAAGGCGATT CACTGAGTGT GACAGCAAGC
TTGGCCTATC TTTCCACCTC AAAGCCTTTG AGTAACTTTG ATGAACTGTA TTCGATATTA
GACCAAGCTT TGTATCAATC AAAAAGAAAC GGGCATAACG CCGTGATTGA TGCTTATAAC
GAGCCTATTG ATCTTCCGAC TTCTGTTTTT GAATCAACGA CTGCATAA
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| Protein sequence | MRTLLSLLAS LFLGSQANAS DTQNITQWHA VYQATMKTNS KSALSMLQDR YHTADSNSEK
LYVSGLIYEY MSNIDQPYYG SSQILENNFA KLESKYILAL SERKSGDYDT SVDIFTSLLQ
SAKQHKDEET KALLNYQLCY TLNQQGQYHK ANFFCSSLNK HLNHDHQESI PADLALRVIA
NNFDFRGEYE VALRLYRRLL TEMPPQSDPT SVYNDVGNLL SELGQYEQSE QYLIQALLAR
QLDAPPLQVA QVEHSLASMY SRSSNYAKAI SHYKNALTLL AEMDYPYGKG LTYLGLGSAY
VNSGDLKSAV PHIKKALELG EEYDNERLQT ESHLAAGFAN LKHNVLDKAL QHGELALALA
NKNATTALQA KAQLLLSQAY QKLDDNSAAL SHYQEYAKLE LANRDDSNVK AIEALDLTKS
EYEYDLQLVK IDNERNLKLL EIEKLSEQQR AYNFIIFCLL TVLLVVLFVL RKTKIKSRLD
RLTGSLNRST IIEKIRAQTV SAPEDMRYVL VLIDLDHFKL INDQHGHPTG DLVLKHVCKA
IQAKLNKGEY IGRLGGEEFI LLLKNVDEID VPFRIQSLHK TISEGQIKSE QGDSLSVTAS
LAYLSTSKPL SNFDELYSIL DQALYQSKRN GHNAVIDAYN EPIDLPTSVF ESTTA
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