Gene VIBHAR_01990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01990 
Symbol 
ID5553129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1984878 
End bp1985891 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content47% 
IMG OID640907477 
Producthypothetical protein 
Protein accessionYP_001445182 
Protein GI156974275 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TCCCTCATTT GGCTCGGTTG CCTGAGCCAA CGCTTTTGAG TACGCCGGAT 
TTTTCCAGCT TATACGGAAG CATTAAAACA GAGCTGCTTG ATGCTCTACA AGAAATTGCA 
CCTGCCGATG TTTCCGCTGT TGAAGAAACG TTAAATAATA ATGCGGAGAT ACTTACCAAA 
TTTACGCAGG TCTTCACTGT CATTCTGCAG AACCATTATC GTCGTTGGAA TGAAAACGCT 
AAACAGATGT TTGGTATGTA CGCCACCCAA GACGATATGG TGGACACTAT TGCTGCTGAT 
ATGGGCTTAA CCCGATTGGT TCTAGAAGAG GGCGACCTTA ACGCTTTCCC TCCAGTTGAG 
CCTGTAATGG AGAGCAATGA GCAGCTTCTC ACTCGTTATT ACCTATCGAT GTTTGCACTG 
GCAACTACTG GAACTCGAAA CGGCTATCGC TTCCACGCGC TAACACCTGG TGCCAGTCCT 
GATATGAAAA TCCAATCACC GGACGAAAAC ACCGTAGTGG TGACTTATCG GTTTAAAGAC 
CATGAGTTTG GTGGTCAGGC TAAAGATGCT CGCTTTGTAA ATCGCGCTCC TGGTACGGGA 
ATTGTGGATG GTTACTTGCT GGCTCATGCT GGCGATGGCA CACCAAGTGA TGAGTTGTTG 
GCTGAAACGC TCGCTTACAT GCGTACTCAC TCAGTAGCCC AAGAGACAGA TATTCTCTAC 
CTGCATAAAG CCAGCATCAA TCGATGGACG TTAGATGCAG TGCTTTATAT CCCTAGTGGG 
CCAGACCAAG ACGTCATCAA AGATGCAGCT GATGTGGCAA TAGCTCAATA TGGTCAAGAG 
CAGCATCGGC TAGAGGGTGG AATCGAGCGT TCCATGATTG ACCATGTTTT ATTGAAAGCG 
ACAAACGGAA GTGGCATCCG AGTTCAAATC AATTCACCAG CAGCAAGCTT TAAGTGTGAT 
CACACAGGAG CGCCATATCT TGAGTCAGTC AACATCAGAG TCGAAACCGA GTAG
 
Protein sequence
MKRFPHLARL PEPTLLSTPD FSSLYGSIKT ELLDALQEIA PADVSAVEET LNNNAEILTK 
FTQVFTVILQ NHYRRWNENA KQMFGMYATQ DDMVDTIAAD MGLTRLVLEE GDLNAFPPVE 
PVMESNEQLL TRYYLSMFAL ATTGTRNGYR FHALTPGASP DMKIQSPDEN TVVVTYRFKD 
HEFGGQAKDA RFVNRAPGTG IVDGYLLAHA GDGTPSDELL AETLAYMRTH SVAQETDILY 
LHKASINRWT LDAVLYIPSG PDQDVIKDAA DVAIAQYGQE QHRLEGGIER SMIDHVLLKA 
TNGSGIRVQI NSPAASFKCD HTGAPYLESV NIRVETE