Gene VIBHAR_01978 details

Gene Information

• Locus tag: VIBHAR_01978
• ID: 5552814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1975306
• End bp: 1977213
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640907465
• Product: hypothetical protein
• Protein accession: YP_001445170
• Protein GI: 156974263
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAGAA CAATCGCCAT CAAGGGAGCG GAGTGGGCAA ATAGGCATTT CCGGTTAGCC 
GCTGGTTCTT CTCAGGAAGA AGGTTTTTGG GAAACACTGC CTTTGCAGGT TGTGCCACTC 
AACATGATGT GCAACCGCGC CATATCCGAG CTGACCATGC AAAAGTCGGC TCGTGTTGGC 
TGGTCCAAGT TGGTCATAGC AGCAAACTCT TGTCTGCATG CTCAGTTCAA AACCAACACC 
GTGATTTACG TACCGACAGA GAGCGATGCA AAAAACATTT CTGTCACCGA GATTGATGCT 
GCTTGGCAGG AAATGCCAAT CATGCACCAA ATTTTCCCAG CCTTATTCGC TAAGGACCAC 
CGAAACACCG TTTCCTACAA ACAGGGAACA GGATGGTCGC TGCACGTTCT CGGCACATCC 
ACACCGCGAA ACATGCGTGC TCTGACTAAA GGCGCGCTGT TTGGTGATGA GATTGACGGG 
TGGGATTGGG AGGTCGGTAA AGAAGGGAAC CCTATCGATC TTGCGCGAAT GCGTTTAGAA 
GGTGCCGCTT TCCCGATGGC AAGATGGGGA ACCACACCAA CCAATACTGG CGAATCACAC 
GTTGAGCGCC TAATGGTGAA GATGGAGCTG ACTTTCCGCT TTTATCTACC ATGCCCACAC 
TGCGGAACCG AGCAGGTTTT AGAGTGGGGC AGTAAAGAAG ATAAGCACGG CTTCAAGTGG 
GACAACACTC AGCCAAGTAT CGAGAAAAAA TCAAAGACGG TTTATTACAG CTGCGTTCAT 
TGTGACGACC CCATCTATTA CAAGCACCTC TACAAGATGG AGTTGGCAGG TCGCTGGATC 
GCCGAAGATG GCACATGGAC ACGCGATGGT CATGAGTTCT TTGACATAGA CGACAACCCA 
GAGCCAACGC CAAGCAGCGT CGGTATTCAC ATTTGGTCAG GATACAACAC CAAATTGAGC 
GCAGGTTGGC GTGGCATAGT GCGTGATTTC CTCAACAAGA AAGACGACCC AAGTCAGCTC 
AAAACTTTCG TCAACCTAAC GCTCGGTGAG CTTTGGGATG GTGAGAATGG AGAGAAGCTA 
GATTGGGAAC ACCTCAAGTC GCGCCGTGAA ATTTGGTGGG CGGAGAGTCG CACCAGTAAC 
CCAGTGCCCG AGCGAGCCGT GGTTTTAACC GGAGGCATTG ATACTCAGGA TGACCGCATC 
GAACTCTTTG TTTGGGCGTG GGGGCCAGGT GAAGAATGTT GGTTTGTCGA GCACATCGTT 
CTTCTCGGGG ATTTATCGAG CCAAGTATTG AAGGATGCCG CCGGAAAAGC GTTGTACCGG 
ACATACAAAA AGCGCAGTGG CCAAGTGATG GACGTTCAGC TTTGGTGTTG GGACGCCATG 
GGCCATAAAA CCGATGACGT CTACCAGATG AGTCGGACGC ATGGCGTGAT GTGGGTGATC 
CCAATACAAG GTGAGAACCA ATACGGAAAG CCGATACAAA ACTTTCCTCG CAAGAAAAAC 
AATAAAAAAG TCTACCTCAC TAGGTTAGGT ACCGACGGTA TCAAGCAACG ACTTTACAGC 
CGCTTAGGTT TAACCCCGAA AGGTGATGAA CCTGTGCCAG GATGTGTTCA TTTTCCATTG 
GATGATGACA TAGCTGGTGA TGAGTTTTTC AAGCAGCTCT GCTCAGCCAA TAAAAAGTTA 
GAGCATGACA AGTCAGGGCG ACAAGTTTGG CGATGGGTGA AGCAATACCA TCCATTTGAT 
GAAGCGTTGG ACGGTTGGGT GTATGCATAT GCGGCACTCA ATATTCTCAC TCAACGGTTC 
GGTCTCGAGC TGGAAGAACC GCAAACTCCA CAACCACAAG AACAACTACA AACACCCGGT 
CTCAGCATCG CTGAGTTGGC CGCGAGATTG AAAGGTGGAT CAAGATGA 

 

Protein sequence

MRRTIAIKGA EWANRHFRLA AGSSQEEGFW ETLPLQVVPL NMMCNRAISE LTMQKSARVG 
WSKLVIAANS CLHAQFKTNT VIYVPTESDA KNISVTEIDA AWQEMPIMHQ IFPALFAKDH 
RNTVSYKQGT GWSLHVLGTS TPRNMRALTK GALFGDEIDG WDWEVGKEGN PIDLARMRLE 
GAAFPMARWG TTPTNTGESH VERLMVKMEL TFRFYLPCPH CGTEQVLEWG SKEDKHGFKW 
DNTQPSIEKK SKTVYYSCVH CDDPIYYKHL YKMELAGRWI AEDGTWTRDG HEFFDIDDNP 
EPTPSSVGIH IWSGYNTKLS AGWRGIVRDF LNKKDDPSQL KTFVNLTLGE LWDGENGEKL 
DWEHLKSRRE IWWAESRTSN PVPERAVVLT GGIDTQDDRI ELFVWAWGPG EECWFVEHIV 
LLGDLSSQVL KDAAGKALYR TYKKRSGQVM DVQLWCWDAM GHKTDDVYQM SRTHGVMWVI 
PIQGENQYGK PIQNFPRKKN NKKVYLTRLG TDGIKQRLYS RLGLTPKGDE PVPGCVHFPL 
DDDIAGDEFF KQLCSANKKL EHDKSGRQVW RWVKQYHPFD EALDGWVYAY AALNILTQRF 
GLELEEPQTP QPQEQLQTPG LSIAELAARL KGGSR