Gene VIBHAR_01945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01945 
Symbol 
ID5553221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1950551 
End bp1951711 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content40% 
IMG OID640907432 
Producthypothetical protein 
Protein accessionYP_001445137 
Protein GI156974230 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC CCGTAATTCG CCCCCGTAAC ACAATGTCTA TTCACGCAAT AGGCTCATGT 
CAGTTGAGTT TCATAATAAA TTACAGCATC ATAGCCGGAA AAAACCCTTC TATAAGCGCT
ACCGCCCTTG GTGAGTTAAG AGGAATTATG GCAAGAATTT GGTTTTCTCC TGGTGACTTA
GCAGATCATC TCCATGAGAT AGTTGGCTAC AAAGCTGGCA TAGCTAGTTC AATTGAACAG
ATGTGCGATT TGTTATCAGG TACCGCCTAT GCTGATGATT TATATAGATC AGAAAGTAAT
GGGCTTGCGC TTCGTTCTGA GGATTATGAG GATTTGTATT ACCAACTTTT ATATAAAGTC
GGGGTTACGG ATACTGCAAG ACCTGGACTA TTTACACAGT CTGAGTTTTT CAAAAGAGTT
ATGAAAGAAA AAGGTCTCGA TTATCTCACT GATATTCAGG ACATCTATAG CAAGCATTAT
CGCTTGGGTG TTGAGCAAGC AGTTAAAAGT GGTCAAAGTT CTATAGATCC TAAGCCAATG
CTCGCTGAAG TGATGATGAA GTATGGTACG ACAGGTGCGC ATGATCTTAT TGATTTAATG
AAAATCTATA ATACCCACTT TCAGAATAGT CCTCACACAT CAGGTCGCTG GGAAGATTGG
AAAGACATCG TGAATCTGAA TGATCTATTC GAGAAACATC AACCTGTAGT TTCACATGGT
ACTTTTCTAG ATCAGCGATT TATCAATTAC CTTTCGAATA ATGCAGCTCG GTTGGGTGAA
ATTCACTGGC GAAAATTCGA AGAACTGATT GGCGAGTGCT TTAGTCGTTC TGGTTATGAA
GTTGAACTTG GACCAGGTAC AAATGACGAT GGAATCGATG TTCGTGTTTG GAATGATTCT
GCTCAAGTAC ACCCTGAATT CATCATTCAA TGCAAACGGT ATAAATCGAA AATCGATAAA
GTAACTGTGA AAGGCTTATA TGCTGATGTC CTAGAAGCAC AAGCTACAAC TGGTCTCCTT
GTAACTACAT CAGAATTCAG TCCTGGTGCT AGAACAACCA TTTCAGCTCG AAGTTACCCA
ATTAAGGAAG TTAATGGAGA AAAGGTTTCT GAGTGGCTAC AAGCTCTGAG AACTCCAGGC
TCAGGTATAA TCAGGGTATA G
 
Protein sequence
MEFPVIRPRN TMSIHAIGSC QLSFIINYSI IAGKNPSISA TALGELRGIM ARIWFSPGDL 
ADHLHEIVGY KAGIASSIEQ MCDLLSGTAY ADDLYRSESN GLALRSEDYE DLYYQLLYKV
GVTDTARPGL FTQSEFFKRV MKEKGLDYLT DIQDIYSKHY RLGVEQAVKS GQSSIDPKPM
LAEVMMKYGT TGAHDLIDLM KIYNTHFQNS PHTSGRWEDW KDIVNLNDLF EKHQPVVSHG
TFLDQRFINY LSNNAARLGE IHWRKFEELI GECFSRSGYE VELGPGTNDD GIDVRVWNDS
AQVHPEFIIQ CKRYKSKIDK VTVKGLYADV LEAQATTGLL VTTSEFSPGA RTTISARSYP
IKEVNGEKVS EWLQALRTPG SGIIRV