Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01945 |
Symbol | |
ID | 5553221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1950551 |
End bp | 1951711 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640907432 |
Product | hypothetical protein |
Protein accession | YP_001445137 |
Protein GI | 156974230 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTC CCGTAATTCG CCCCCGTAAC ACAATGTCTA TTCACGCAAT AGGCTCATGT CAGTTGAGTT TCATAATAAA TTACAGCATC ATAGCCGGAA AAAACCCTTC TATAAGCGCT ACCGCCCTTG GTGAGTTAAG AGGAATTATG GCAAGAATTT GGTTTTCTCC TGGTGACTTA GCAGATCATC TCCATGAGAT AGTTGGCTAC AAAGCTGGCA TAGCTAGTTC AATTGAACAG ATGTGCGATT TGTTATCAGG TACCGCCTAT GCTGATGATT TATATAGATC AGAAAGTAAT GGGCTTGCGC TTCGTTCTGA GGATTATGAG GATTTGTATT ACCAACTTTT ATATAAAGTC GGGGTTACGG ATACTGCAAG ACCTGGACTA TTTACACAGT CTGAGTTTTT CAAAAGAGTT ATGAAAGAAA AAGGTCTCGA TTATCTCACT GATATTCAGG ACATCTATAG CAAGCATTAT CGCTTGGGTG TTGAGCAAGC AGTTAAAAGT GGTCAAAGTT CTATAGATCC TAAGCCAATG CTCGCTGAAG TGATGATGAA GTATGGTACG ACAGGTGCGC ATGATCTTAT TGATTTAATG AAAATCTATA ATACCCACTT TCAGAATAGT CCTCACACAT CAGGTCGCTG GGAAGATTGG AAAGACATCG TGAATCTGAA TGATCTATTC GAGAAACATC AACCTGTAGT TTCACATGGT ACTTTTCTAG ATCAGCGATT TATCAATTAC CTTTCGAATA ATGCAGCTCG GTTGGGTGAA ATTCACTGGC GAAAATTCGA AGAACTGATT GGCGAGTGCT TTAGTCGTTC TGGTTATGAA GTTGAACTTG GACCAGGTAC AAATGACGAT GGAATCGATG TTCGTGTTTG GAATGATTCT GCTCAAGTAC ACCCTGAATT CATCATTCAA TGCAAACGGT ATAAATCGAA AATCGATAAA GTAACTGTGA AAGGCTTATA TGCTGATGTC CTAGAAGCAC AAGCTACAAC TGGTCTCCTT GTAACTACAT CAGAATTCAG TCCTGGTGCT AGAACAACCA TTTCAGCTCG AAGTTACCCA ATTAAGGAAG TTAATGGAGA AAAGGTTTCT GAGTGGCTAC AAGCTCTGAG AACTCCAGGC TCAGGTATAA TCAGGGTATA G
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Protein sequence | MEFPVIRPRN TMSIHAIGSC QLSFIINYSI IAGKNPSISA TALGELRGIM ARIWFSPGDL ADHLHEIVGY KAGIASSIEQ MCDLLSGTAY ADDLYRSESN GLALRSEDYE DLYYQLLYKV GVTDTARPGL FTQSEFFKRV MKEKGLDYLT DIQDIYSKHY RLGVEQAVKS GQSSIDPKPM LAEVMMKYGT TGAHDLIDLM KIYNTHFQNS PHTSGRWEDW KDIVNLNDLF EKHQPVVSHG TFLDQRFINY LSNNAARLGE IHWRKFEELI GECFSRSGYE VELGPGTNDD GIDVRVWNDS AQVHPEFIIQ CKRYKSKIDK VTVKGLYADV LEAQATTGLL VTTSEFSPGA RTTISARSYP IKEVNGEKVS EWLQALRTPG SGIIRV
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