Gene VIBHAR_01789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01789 
Symbol 
ID5552907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1801799 
End bp1802743 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content49% 
IMG OID640907280 
Producthypothetical protein 
Protein accessionYP_001444985 
Protein GI156974078 
COG category[R] General function prediction only 
COG ID[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCGG CTCTCGGTAC CTTGCCAGAT CTGGATGTGA TTCTGGACTA CGGTGATGCG 
GTTCAGAACA CGATTAAGCA TCGTGGCTTT ACGCACTCTT TACTGGTATT GCCTCCTTTT
GCGTTGCTGA TTTCTTGGCT TTATTGCCGC TGGCGACCTG ATTCTTTCTG GACGTTATCA
CGAGTGTTTT TCCTCACCGT CAGTGTATTC GTGACGCATA CCTTACTGGA TGCAATGACG
ACGTATGGCA CTCAGCTTAT TTGGCCATTT GAGGGCTATT TTGAGCTACG GAACGTGTTT
ATTATCGATC CGCTTTACAC CTTGCCGCTG TTGCTGGCGA TTGGCGTGGC ACTGTTTTCT
AAATCTCGCG GTGGACGCTG GTGTCAAAGC ATGGTGCTTA TCTCTACGCT TTATCTCGGT
TGGGGATACG TTTCTCAACA AATGGTTGCG TCTCGTGTTG AGCAAAACTT GGCTGCGCAG
AACTTACCGA ATCAGCAAGT GCTGATTACA CCAACGCCGT TTAACACGTT TCTATGGCGC
GTGGTGGTGA TGGACGATGG CCAATATTAC GAAGGTTTAG CGTCGGTATT AGACAGTGAT
CAGCGCATTG ATTTTGTTAC GCATCCTCTT GGCAGTTGGC CGATGGCAGA TAAGCCGGAC
ACGCTGAAAG GATTAAAGGC TTTTTCTCAC GATTACCTCA ACTATCGCGT GGAAGATGAT
GCTCTGATTG TGACGGACTT GCGTTTGGGT ATGTCTAACA ATCTGTCGTT CGAGTTTATC
TTTGCTGAGA AAGGTGAAGA TGGGCAGTGG CAGCTCTTAG AGTCGACCCA ACGTTATCCG
AGTGAGCGCA GTTTAGATTT GCTCGGTCAG CTTTGGGAGA GACTGAAGGG TGACCAGAGT
ATTGATGCGA ATCTGCAGCG TATGGAGTTG AGTGCACGTT CTTAG
 
Protein sequence
MGAALGTLPD LDVILDYGDA VQNTIKHRGF THSLLVLPPF ALLISWLYCR WRPDSFWTLS 
RVFFLTVSVF VTHTLLDAMT TYGTQLIWPF EGYFELRNVF IIDPLYTLPL LLAIGVALFS
KSRGGRWCQS MVLISTLYLG WGYVSQQMVA SRVEQNLAAQ NLPNQQVLIT PTPFNTFLWR
VVVMDDGQYY EGLASVLDSD QRIDFVTHPL GSWPMADKPD TLKGLKAFSH DYLNYRVEDD
ALIVTDLRLG MSNNLSFEFI FAEKGEDGQW QLLESTQRYP SERSLDLLGQ LWERLKGDQS
IDANLQRMEL SARS