Gene VIBHAR_01778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01778 
Symbol 
ID5556455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1789065 
End bp1790225 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content39% 
IMG OID640907269 
Productsite-specific DNA-methyltransferase 
Protein accessionYP_001444974 
Protein GI156974067 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT CGATAGAACT AACAGTTAAA GGTTCAAGTT TGTCTGTAGC AAAACCACCA 
ATTATTTTTT CATTTTTTTC CGGTAGTGGC TTTTTAGATC TTGGCTTTGA AATGTCCGGG
TTTGATGTTC GTTTTGTGAA CGAATTCCAC GAACCTTTCT TAAATTCTTA CAAGTATTCA
AGAAAACAAA TGAATTTGGC TGAACCCAAA TATGGCCATT TCTTAGGAAG TATTGAAGAT
TTTGTTACCG GAGAGCGGGC AACTGAGCTC TCTGGGTTTG TGAACAATGC CAAATCAGAG
TCTTTAGTGG GCTTTATAGG AGGCCCTCCA TGCCCTGATT TTTCTGTTGC TGGTAAGAAC
AAAGGTTCTG AAGGGGAAAA TGGCAAACTC AGCCGAGTAT ATATAGATGC GATCATCAAA
AATAAGCCAG ACTTCTTTTT GTTTGAAAAC GTAAAGGGCC TTTGGAGAAC TGTCAAGCAC
AGAGCATTTT ATGAAGAGAT GAAAGAACGG TTAGAAATGG CAGGGTATGT ACTAACCGAC
CGCTTAACTA ATTGTATTGA GTATGGTGTA CCACAAGATA GGGATAGGAT ATTACTTTTT
GGTATCCTTA AATCACGAGC AGGAATCATA CAGTCTAGTA CTCTGGAAGA AAAATTTGAT
TGGCAGTCAA AGGTTAAGTT TGACCGCAAT AAAGTGTTAG ACAAAAAAAT CTGGCCTAGT
CAGGAAGAGT ATGCACAAGA TTCTGTCAAG GTCTGCCCCA AAACCTTGGA GCAATACAGA
GAACTAACTG TTGAACATTG GTTTATAGAA AACAATGTAT ATGAACATCC TAATGCTTCT
CATCACTTTA AACCGCAAGC TCTACATAGG TTCCAGACGG TTCTTGAGGG TGATGATAGC
AAGAAGTCAT TTAAGCGTTT GCATCGTTGG CGGTATTCTC CTACAGCTGC ATATGGTAAT
AACGAGGTAC ATTTGCACCC GTATAAAGAT CGTCGTTTGA GTGCAGCTGA GTCTCTAGCA
ATACAATCAC TTCCTAAAGA GTTTTGCTTA CCACCTACAA TGACGTTATC AGATATGTTC
AAGACTATAG GTAACGGTGT TCCATTTATT GCTTCGAAAA AGATTGCAGA AACAATTAAT
ACTTATTTGG ACACATTATA A
 
Protein sequence
MNLSIELTVK GSSLSVAKPP IIFSFFSGSG FLDLGFEMSG FDVRFVNEFH EPFLNSYKYS 
RKQMNLAEPK YGHFLGSIED FVTGERATEL SGFVNNAKSE SLVGFIGGPP CPDFSVAGKN
KGSEGENGKL SRVYIDAIIK NKPDFFLFEN VKGLWRTVKH RAFYEEMKER LEMAGYVLTD
RLTNCIEYGV PQDRDRILLF GILKSRAGII QSSTLEEKFD WQSKVKFDRN KVLDKKIWPS
QEEYAQDSVK VCPKTLEQYR ELTVEHWFIE NNVYEHPNAS HHFKPQALHR FQTVLEGDDS
KKSFKRLHRW RYSPTAAYGN NEVHLHPYKD RRLSAAESLA IQSLPKEFCL PPTMTLSDMF
KTIGNGVPFI ASKKIAETIN TYLDTL