Gene VIBHAR_01609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01609 
Symbol 
ID5553227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1619300 
End bp1620328 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content48% 
IMG OID640907100 
Producthypothetical protein 
Protein accessionYP_001444806 
Protein GI156973899 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA ACAAGAAGAA ACGCAAAGAA TACACCAAGC CGATAGCGAT ATCGGTTGGT 
TTGCATGTGC TGTTAGTCGT TGCTCTGCTT TGGGGTACGG ATTTCACAAT GTCGAAACCA 
GAGCCGACAG GGCAGATGGT TCAGGCTGTG GTGATTGATC CAAAACTTGT TCAGAAACAA 
GCGAACGAGA TTCGTCAGCA ACGCGAAAAA GCCGCGAAGA AAGAGCAAGA CCGTCTGGAT 
AAACTGAGAC GTGAAGCTGA GCAGCTTGAG AAAAACCGTA AAGCTGAAGA AGAACAGATT 
CGTAAGCTAA AAGAGCAGCA GGCAAAAGAC GCCAAAGCCG CTCGTGAAGC TGAAGCTGCT 
CGCAAGAAGA AAGAACAAGA ACGTAAGGCC GAAGAAGAAC GCACTCGCAA AGCGAAAGAG 
CAAGCGGCAA AAGCCGAGAA AGAGCGTAAA GCCAAAGAAG AGGCAGTACG TAAGGCAGAG 
CAGGAGCGTG TAGCACGTGA GAAAGCCGCG AAAGAAGCGG AAGAAAAAGC GAAACGTGAA 
CGCGAAGCGG CAGCAAAAGC CGAACAAGAA CGCATCGCGA AAGAAAAGGC AGCCAAAGAG 
GCCGCAGAGA AAGCGCGTAA AGAAAAAGAG CGTCTTGAGC AAATCGAGCG TGAGCGTAAA 
GAACAAGAAG CGGCACTGGA TGACATCTTT GCCGGTCTAG AAAGTGAGTC GAGTGCAAAC 
CAACAGGCAC AAGGGCAATT TGTCGCTGAC GAAGTTTCTC GTTACAGCTC AATCTATACT 
CAGCTTATTC AAAGCAAATT GCTAAAGGAC GACTACCTAT TGGGAAAGGA GTGTAGAGTT 
AACATTAAGC TGATTCCGAC AGGGGCAGAC ATGATAGTCT CATCGGTGAG TGTGCTTTCT 
GGAGACTCTA GAGTATGTGC GGCTGCAAAA AGTGCAATCG CGCAAGTGCC AAGTTTTCCA 
ATGTCTACCG ATTCAACAGT TAACCAAAGG CTGAAGGATA TTAACCTTAC GGTCGCACTA 
CAACAATAA
 
Protein sequence
MKDNKKKRKE YTKPIAISVG LHVLLVVALL WGTDFTMSKP EPTGQMVQAV VIDPKLVQKQ 
ANEIRQQREK AAKKEQDRLD KLRREAEQLE KNRKAEEEQI RKLKEQQAKD AKAAREAEAA 
RKKKEQERKA EEERTRKAKE QAAKAEKERK AKEEAVRKAE QERVAREKAA KEAEEKAKRE 
REAAAKAEQE RIAKEKAAKE AAEKARKEKE RLEQIERERK EQEAALDDIF AGLESESSAN 
QQAQGQFVAD EVSRYSSIYT QLIQSKLLKD DYLLGKECRV NIKLIPTGAD MIVSSVSVLS 
GDSRVCAAAK SAIAQVPSFP MSTDSTVNQR LKDINLTVAL QQ