Gene VIBHAR_01596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01596 
Symbol 
ID5553872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1607112 
End bp1607978 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID640907087 
Producthypothetical protein 
Protein accessionYP_001444793 
Protein GI156973886 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT TACCCCTTCG ACTTGGTTTG ACCATGTGGT CGCACAACCA GTGGCAACAA 
AGCTTTTATG GCAGTGGCAC CAAGCCTGCA GAGCGACTCG AAAAGTACGC GCAGGTGTTC
CATACCGTAG AAGGCAACAC CACCTTTTAT GCCACACCGA CGCTCAATAC GGTGCAAAAC
TGGAAAGCCG CGACTCACGA CGATTTCAAA TTCACCTTTA AGTTGCCAAA AGCCATTACT
CACGAACAAA TGCTCAGAGG TTGCGACGAG CAGCTACGTG ACTTTATGAC AATCATGGAA
CCGCTTCATG AACGTGTTGG GCAATGGACG ATTCAGCTCC CAGCCGCTTT CGGGCCTGAG
CATCTTGAGC GCCTGAAGAA GTTCTGTGCC AGCTTTCCGC CGAATTTCCC ACTTGGGGTG
GAAGTTCGTC ATATGGCTTT TTTCTCCAAA GGTGAAGAAG AACGCGCGTT GAATCAATGG
CTGTTAGAGA GCGGCATCGA CCGCATTATT ATGGACAGCC GCCCTGTATT CGCCGCGCAG
CCGACAACTG AAGCGGTAAT CGATGCCCAC CACAAAAAGC CTCGCGTTCC GGTGCATGCA
ATTGCAACCG CCAAGCATCC AATGATTCGT TTTATTGGCC ATCCAGATAT GGACGATAAC
CTGCGCTTTT TCGAACCTTG GTTGAAGAAG CTGCCGATGT GGATTGAACA AGGTATTCAA
CCGTACTTGA TGATTCACAC ACCAGATAAC GTGTTAGCAC CAGAACTGGC TGAAAAGCTA
TATAAACAGC TACAACTTAG GCTTTCACTG CCGAACTTGT CTGTATTTCC TGCCAACGAT
GGCAACTCGC AAATACAAAT GTTTTAG
 
Protein sequence
MDNLPLRLGL TMWSHNQWQQ SFYGSGTKPA ERLEKYAQVF HTVEGNTTFY ATPTLNTVQN 
WKAATHDDFK FTFKLPKAIT HEQMLRGCDE QLRDFMTIME PLHERVGQWT IQLPAAFGPE
HLERLKKFCA SFPPNFPLGV EVRHMAFFSK GEEERALNQW LLESGIDRII MDSRPVFAAQ
PTTEAVIDAH HKKPRVPVHA IATAKHPMIR FIGHPDMDDN LRFFEPWLKK LPMWIEQGIQ
PYLMIHTPDN VLAPELAEKL YKQLQLRLSL PNLSVFPAND GNSQIQMF