Gene VIBHAR_01454 details

Gene Information

• Locus tag: VIBHAR_01454
• ID: 5555450
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1470331
• End bp: 1472328
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640906945
• Product: hypothetical protein
• Protein accession: YP_001444652
• Protein GI: 156973745
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAAG TAGTTCAAAG GCTGTTGGTT TTTGCTTGCT TTCTATTGAG CCTGAGTCTC 
AAAGCAGAAC CAGAGTATGT CTCCCATTAT AAGGTAGCGA CAGAAGCGGA TGATGTCGTT 
ACACGTGTCC TGTTTGATGC GGTGGCGGAA AAATTTGGTG TCTCAATTGA ATATGTTAAT 
TATTCGAGCT TTGATGGGAT TTTAGATTCT GTTGCTCGCG GTGAAAGTGA TTTCGCTGCG 
AATATCACTT TCACCCAAGA ACGCGCTCAG AAGTTCAGTT ATTCACGCCC AACCAATATT 
GAGTACACCT ATCTTTATGG TTTGAGCGGC ATGACACTGA GTGAAGCGAA TGTTGTTGGT 
GTGCCTAAAG GCACCATCTA CGAAGCGCTG ATCCAGCAAA ACTATCCAGA GTTGCTTCTA 
GTGCCATATC AAGGGCATGA AGAAGCGGTG TCATTGCTTC GCTCTCGTAA GGTTGATGGC 
GTAGTGGATG CCATCAACCA GCTCAAGCCT ATGCTATTAG AAGGGTTTGA TGCGACACTG 
CTGAATGACC ATATCTCAAT CAAACCCGTT TCTATTGTGA GTCAGAAAGG CGCGCACCTC 
GAAGTTCTTG CACAGTTTGC TGACTTTATT CATAGCGAAG AAGTTCAGAA ATTGCTGCGA 
GAGAAGGTAG CCTTGTACCA ATTCAAACTG AGACAAACCG CGTTACGTGA ATCAATTAAG 
CAGTTGCCTA TCGATCTCGA AAAACCGTTT ACGATTAAAT TTGAATCTAT TTTCCCTTAT 
GTGGTTTATC GCTCAGATGG AAGCTTAGAG GGGATGACCG CCGATGTGGT GCTTAAGAGT 
TGTGAAATCT TGGCTCTGAA TTGCGTGGTG ATCAGCAAAC CAAACGAGAG CTGGGAATCG 
ATGTATAACC AGTTCATTGA AGGGGAGTTC GATATGCTTG CGCCGCTGAC CATCAGCCGT 
GAGCGACGTG CGTTCAGTTA CTTCCCTGAG TACCATTATC AACCAACCTC TATAATGGTA 
AAACGCCTTG GATACAAGCC AAATGTGTAT TCTCATGTGT CCCAATTGAT ATCAGAGCGC 
ATTGGTGTCG TGAAGGATGA TTTCTTTGAT CAGATGCTGA CGCAAATGTT GCCATTAAAG 
GAACTGAATC GTTTTGATTC ACAGCAGGCG ATGTTGGATG CGCTACTTGC CAGAGAGATT 
GACTACATTG CAATGGACAC CGCGATGCTC AATCACTTCC TGCGTCTTAG TGAACTGATT 
CCTATTGAAC AAGATGATGC GATTGGTGAG TTCTACCAGT CTGAATTGTC TGTTGGTTTA 
ACGAATAATG AACGTGGCAA AATTCTCGCC CCGTATTTTA GTCGTGCGAT TTCTATGTTG 
GATCTGGAAA AGATTGTTGC CCAATACGAT TTGAGGCCAG ACTGGCGTAC GGCACTGGAG 
TACGAAGTTC GCTTAGCAAC CCAAACGCAA GCGGTGTTTA TTTTTGTGCT GGTGTTCGCG 
CTGGGTGTCA GTCTGTATTT GTACCGTCAG TCGAACACCG ACAATTTAAC TGGGCTTAGA 
AATCGCCGCT CTTTACAGGT GAAATACCGC CAAGGTGTAC CGAAAGATCT TGCTATTTTG 
TACCTTGATA TCAATAAATT TAAGCAAATC AATGATACCT ACGGACACAG AGCCGGGGAT 
AAGGTACTAC AGTTGCTGTC GCTAAAAATA CATCGAGTAT GGACGGGTAG GAGCTATCGT 
ATTGGTGGTG ACGAGTTTAT TTTGCTCGGC TATCCGACGG AGATGCAGCT AGCGAGGGCA 
ATAGAAGAGC TTAACTGCCT AGAGGTAAAA GAGGAGCTAT TTGGTGATTT AAGCCAAGTA 
ACGATTTCCG TTGGTGTTTC TGCTAAGCGT GAGCGCAGTG TCAGTCTTGA ACAAGCATTG 
CACCTCGCAG ATGAAGATAT GTACTCAAGT AAGCAAGCAT CTCGTGATTG CAAGGAATCA 
ACTCCTTGTC TAGTTTGA 

 

Protein sequence

MVKVVQRLLV FACFLLSLSL KAEPEYVSHY KVATEADDVV TRVLFDAVAE KFGVSIEYVN 
YSSFDGILDS VARGESDFAA NITFTQERAQ KFSYSRPTNI EYTYLYGLSG MTLSEANVVG 
VPKGTIYEAL IQQNYPELLL VPYQGHEEAV SLLRSRKVDG VVDAINQLKP MLLEGFDATL 
LNDHISIKPV SIVSQKGAHL EVLAQFADFI HSEEVQKLLR EKVALYQFKL RQTALRESIK 
QLPIDLEKPF TIKFESIFPY VVYRSDGSLE GMTADVVLKS CEILALNCVV ISKPNESWES 
MYNQFIEGEF DMLAPLTISR ERRAFSYFPE YHYQPTSIMV KRLGYKPNVY SHVSQLISER 
IGVVKDDFFD QMLTQMLPLK ELNRFDSQQA MLDALLAREI DYIAMDTAML NHFLRLSELI 
PIEQDDAIGE FYQSELSVGL TNNERGKILA PYFSRAISML DLEKIVAQYD LRPDWRTALE 
YEVRLATQTQ AVFIFVLVFA LGVSLYLYRQ SNTDNLTGLR NRRSLQVKYR QGVPKDLAIL 
YLDINKFKQI NDTYGHRAGD KVLQLLSLKI HRVWTGRSYR IGGDEFILLG YPTEMQLARA 
IEELNCLEVK EELFGDLSQV TISVGVSAKR ERSVSLEQAL HLADEDMYSS KQASRDCKES 
TPCLV