Gene VIBHAR_01398 details

Gene Information

• Locus tag: VIBHAR_01398
• ID: 5555744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1411351
• End bp: 1412571
• Gene Length: 1221 bp
• Protein Length: 406 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640906890
• Product: hypothetical protein
• Protein accession: YP_001444601
• Protein GI: 156973694
• COG category: [H] Coenzyme transport and metabolism; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1169] Isochorismate synthase
• TIGRFAM ID: [TIGR00543] isochorismate synthases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATGC TTCGTAACTC AATGGGAAGT AGCACTATGC TCACCGAGTT TCTTAACGCT 
CATACGGATG ATGCTTCGTT CTTTTTTAGC TCACCGACGG TGACCTTACT TACCCAAGGC 
ATTACCGCAG AATTTTCCCA ACAGGTGAAA TTCTCCGAGT TAGATACTCA CATCAGTCAA 
TTACTTGAAT CGGCAAAGGA TGCGGGAAAC CAAAACCCCA TTGCGGTGGG AGTGATTCCG 
TTCTCTGAAC ACAACCCGGT GCACTTTATC GTCCCAGACC GTCTTATCAC GACGTCACCA 
ATCAGACCGG ATAAAGTTTC TGATGTGGAT GGGGTTGCTG ATTGTCCACC TTCATCGATC 
CAACCGATTC CTACTCCTGA AGAGTACATG CGCAGTGTCG AGTTGGCGGC GACAAGCTGC 
TGTCGAGAGG ACATTGATCT GGATAAAGTG GTGTTATCAC GCACCATGCA GGTCGATACG 
GAAGAGGAAA TTGACCGTGC ACGCCTCTTG AAAACCTTAC TCAAACAAAA CCCAGGTGGC 
TACACGTTTT CTACCCGTAT TGGTGGCAGT CAATCTGACG CGTATTTAAT GGGCTCGAGC 
CCTGAATTGC TTGTATCACG CAAAGGCCCG CACGTTTGTT CCAACCCTCT GGCGGGTTCT 
CGCCGACGCA GTGACAACGA ATGCATTAAC CAACAGCAAG GTGAGCTGAT GATGGAGAGT 
GCAAAAGATC TCCATGAGCA TGCCGTGGTG GTGGATGCAG TTGAAAAAGC GCTGCAGCCT 
TGGTGCCATA ACCTGTATGT GCCGATGGTG CCATCGGTGA TAGAAACCAA AGCCATGCTT 
CACCTCTCGA CTCGCATCGA GGGCACGGTA TCGGATGCAA ACACGAGTGT GTTGAAGTTA 
GCAAGTGCAC TGCACCCAAC GCCAGCCGTA TGCGGTTATC CGACGACGCA AGCTTACGAT 
TTTATTAGCC ATGTTGAACC TTTTGACCGC GGTTACTTTA CCGGTCTTGT TGGTTGGGTT 
GATGCTCGTG GCAATGGTGA ATGGGTGGTC GTGATTCGTT GTGCGGAGGT CGAGAAAAAA 
CGCCTCAAAG TATACGCGGG CGCTGGGATT GTGGCAGGCT CTGAGCCACA AAGTGAGCTG 
GAAGAAACCG GTAACAAGAT GCGCACTGTA CTCAATGCGT TGGGCATCGA GATCCGTGAA 
AACATGGAGG TGGTGCAATG A 

 

Protein sequence

MIMLRNSMGS STMLTEFLNA HTDDASFFFS SPTVTLLTQG ITAEFSQQVK FSELDTHISQ 
LLESAKDAGN QNPIAVGVIP FSEHNPVHFI VPDRLITTSP IRPDKVSDVD GVADCPPSSI 
QPIPTPEEYM RSVELAATSC CREDIDLDKV VLSRTMQVDT EEEIDRARLL KTLLKQNPGG 
YTFSTRIGGS QSDAYLMGSS PELLVSRKGP HVCSNPLAGS RRRSDNECIN QQQGELMMES 
AKDLHEHAVV VDAVEKALQP WCHNLYVPMV PSVIETKAML HLSTRIEGTV SDANTSVLKL 
ASALHPTPAV CGYPTTQAYD FISHVEPFDR GYFTGLVGWV DARGNGEWVV VIRCAEVEKK 
RLKVYAGAGI VAGSEPQSEL EETGNKMRTV LNALGIEIRE NMEVVQ