Gene VIBHAR_01189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01189 
Symbolxni 
ID5556012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1204583 
End bp1205365 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID640906681 
Productexonuclease IX 
Protein accessionYP_001444405 
Protein GI156973498 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTC ATCTTGTTAT CATTGATGCC CTAAACCTGA TCCGCCGCGT GCACTCAGCG 
CAACCCGATC CTACTGACAT AGCAAGAACC ATTACCACCA CAGGCAGAAC ACTGACTCGC 
ATCCTGTCTG AAGCGCAACC GACGCACATC ATCGCGGTAT TTGATCACCA TGAACAAGAT 
CGCGGCTGGC GCGCAGAAAT TCTCCCGGAC TACAAACAAA ACCGAAAGCC CATGCCAGAG 
CCTTTGATCA AGGGCTTAGA TGCGCTCCAA CAAGCGTGGT GGGAACAAGG TATTGATTCG 
CTGCTGTCTG AAGGCGACGA GGCGGATGAC TTGGTTGCAA CTCTGGCCAC CAAAGTCGCC 
AGTCACGGAG AGAAGGTCAC GATAGTCTCG ACCGATAAAG GATACTGCCA GTTGCTGTCC 
CCGACTTTGC AAATCCGTGA TTACTTCCAA CACCGCTGGC TGGATGAGCC GTTTATCGAA 
AAAGAGTTTG GCGTAAAACC ATCCCAGCTT GCCGACTACT GGGGCTTAAC GGGCATCAGT 
TCAAGCCAAG TTCCGGGCGT TCCCGGTGTA GGTCCAAAAG CAGCAAAGGA AATTCTCACT 
CAGTTTGAGG ACATTGAAGC GGCATACGCA AGTGAAGAGC TGGTACCGAA ATATCGTAAG 
AAGTTGGATG AACACATTGA GTCTGCGCGT CTATGCAAGC GAGTAGCAGC GCTGAAATGC 
GATATCGATC TCGGCTTTAA CCTGCAAGAT ATTCGCTTTA CCGGACCAAA TAAAGCGCAA 
TAG
 
Protein sequence
MSIHLVIIDA LNLIRRVHSA QPDPTDIART ITTTGRTLTR ILSEAQPTHI IAVFDHHEQD 
RGWRAEILPD YKQNRKPMPE PLIKGLDALQ QAWWEQGIDS LLSEGDEADD LVATLATKVA 
SHGEKVTIVS TDKGYCQLLS PTLQIRDYFQ HRWLDEPFIE KEFGVKPSQL ADYWGLTGIS 
SSQVPGVPGV GPKAAKEILT QFEDIEAAYA SEELVPKYRK KLDEHIESAR LCKRVAALKC 
DIDLGFNLQD IRFTGPNKAQ