Gene VIBHAR_01136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01136 
Symbol 
ID5553685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1153599 
End bp1153985 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content46% 
IMG OID640906628 
ProductTfp pilus assembly protein PilE 
Protein accessionYP_001444353 
Protein GI156973446 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGA TCGAATTACT GATAGCCGTT GTGATCGTCG GTATCATTGC CGCTATCGCC 
TATCCGTCTT ATAGCAACCA CAGTATCACT GCCCATCGCA CCGTTGCGAT TAGTGATATT 
GCTCGTCTTC AATTGGAACT CGAAACGTCT TATGACGGGG GCTACGACTG GGGTGGATTG 
GTATCTGGTG GGCATTGTAC GATCTGCGAT TCAGACTCAG ACCGCTTTTC ATTTAATATC 
GTCAGTTCAG CGACTTTAGC GTACAGAATT GAAGCGACAG CCAAGTCTGA TTTAGGGCAA 
AACAACGACA GTTGCTTCAC TGGCCAAGAC AAAAAAATAA CACTCACTTC AACCAACATT 
GAATCGCCAA GCGATTGTTG GAACTAG
 
Protein sequence
MTLIELLIAV VIVGIIAAIA YPSYSNHSIT AHRTVAISDI ARLQLELETS YDGGYDWGGL 
VSGGHCTICD SDSDRFSFNI VSSATLAYRI EATAKSDLGQ NNDSCFTGQD KKITLTSTNI 
ESPSDCWN