Gene VIBHAR_01088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01088 
Symbol 
ID5554558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1100620 
End bp1101120 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content42% 
IMG OID640906581 
Producthypothetical protein 
Protein accessionYP_001444307 
Protein GI156973400 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACGG GTATAGAGCA AATAGGAGTG CGCTCGACTC GTATCAGGGC AAAAGATAGA 
ACCCAAATTA CCATCACCAA CGGGGACTTG ATTAAGCATG AAATCATCAA CTTTAGCCGT 
CGAGACCGTT ACCCGTTCAA GGCAACCATT GGATTACGGT ATGAGACCAG TATGTCTCAA 
CTCCAAACGA TCACGAAGAA GATCGCAAAC TTGCTCCAAG AGCACCCTAA CGTTTTAGAT 
TCACCTATTC GAGTACACTT TGATACCTTC AATGCCTACA GTTTGGATAT TAAAGTTCTT 
GCTCACCTGA ATACAACGAA TAAAGAGACA TTTCTTAATT TGCAGCAATC ACTACTGATA 
TCGATTAATC AGATTATTGA AGCGGAAGGC GCAAAGTTCG CTTTGCCTTC TCATACCACT 
TATCTCGCCA CCGATTCTGT ACAGCCGGCA GCTACAGCCC AAGTTCAAAT TAAAGCTCAA 
GCAATAGATC AAAACACATA A
 
Protein sequence
MITGIEQIGV RSTRIRAKDR TQITITNGDL IKHEIINFSR RDRYPFKATI GLRYETSMSQ 
LQTITKKIAN LLQEHPNVLD SPIRVHFDTF NAYSLDIKVL AHLNTTNKET FLNLQQSLLI 
SINQIIEAEG AKFALPSHTT YLATDSVQPA ATAQVQIKAQ AIDQNT