Gene VIBHAR_00995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00995 
Symbol 
ID5553700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1004021 
End bp1005022 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content48% 
IMG OID640906489 
Producthypothetical protein 
Protein accessionYP_001444221 
Protein GI156973314 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA AAATCATCAT GCAGATCCCG ACAAAAGACG GGAATCAGCA GTTTCATTTG 
GGTCGCCTTT CGATCCTAAC CATCTGTGCA TCTGTTGTTG CATTGCCCGC TGTCGTCGGC 
GGCGCATGGT ATCTGAACCA AAAGCAAGTT CATGATACGC AAACCCTTAG TCAGACCATC 
GCTAAGCTTG AAAGTGAAAA AGCAGAGATC ACTGCGCTTT ACGAAGAACA ATTGGATACC 
AACCACTCAC TGTCTCAATC TCTGACGGAC AAAAACAACC AGATTCAACT GCTAGGCAAG 
CGTGTATTCG ACGTGGAATC TGTATTGGGT CTTGCTGATG AAGAGTTAGT GGGTGAAGAG 
AATAACCTCG CGTTAGAGGA ACGTATCGAT GCAGCCGCTA TTGACTCGGC CGTTCGAGCC 
ACCATGTTCC GTTTGATTCC CAACGATAGC CCGATGACTT ATCAGCGCAT CTCATCGCCA 
TATGGCAGCC GAATTAATCC AATTTCGGGT AAACGTCATG TGCACACTGG CATCGACTTA 
ACCTGTAAGC GTGGCGAAGA GATTCTTGCG CCAGCGGATG GTGTTGTAGA GACCGTACGT 
CCAAGTAATC GCGGCTACGG CAACTACCTA ACGTTACGCC ACTCGTTTGG TTTCTCAAGC 
TCGTTTGCCC ACCTCAATAA GTTCAGTGTA AAAAGCGGTG AGTTTGTCAG TAAAGGCGAT 
GTGATTGCGA AATGTGGTAA CTCGGGTAAC TCAACCGGCC CGCACCTGCA TTACGAAGTA 
CGCTTCCTAG GTCGCACATT AAACCCACGT TACCTAATGG ACTGGACACC GGAGAACTTC 
AACTCCGTGT TTGAAAAAGA GAAGATGGTG AAATGGGGCC CATTGGTTCA GTTAATTGAC 
AATGTCGTTC GTCTGCAAAT CAATCTAACC AACTCTCCAT ACCGTGATAC CAGCATCAGC 
ACAGTATTAA GTGAAGACAA CAGTGGCACA TCGACCAACT GA
 
Protein sequence
MSKKIIMQIP TKDGNQQFHL GRLSILTICA SVVALPAVVG GAWYLNQKQV HDTQTLSQTI 
AKLESEKAEI TALYEEQLDT NHSLSQSLTD KNNQIQLLGK RVFDVESVLG LADEELVGEE 
NNLALEERID AAAIDSAVRA TMFRLIPNDS PMTYQRISSP YGSRINPISG KRHVHTGIDL 
TCKRGEEILA PADGVVETVR PSNRGYGNYL TLRHSFGFSS SFAHLNKFSV KSGEFVSKGD 
VIAKCGNSGN STGPHLHYEV RFLGRTLNPR YLMDWTPENF NSVFEKEKMV KWGPLVQLID 
NVVRLQINLT NSPYRDTSIS TVLSEDNSGT STN