Gene VIBHAR_00946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00946 
Symbol 
ID5553659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp950688 
End bp951239 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID640906440 
Producthypothetical protein 
Protein accessionYP_001444172 
Protein GI156973265 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATCG AAAGAATTCG ACGCGAACAC GGCTATATGG TCCGTCTGTT GGCGATACTG 
CGCCACAAAT TGAATGAGAT TAAACAAGAG CACGCTATCA ACTATGCGTT GGTGAGTGAA 
ATTGTGGATT ACCTCTCTAA CCATTCGGAA AAGATTCATC ACCTTAAAGA AGACATTCTC 
TACCACTATT TTCTGGAACA CTATGGTCAG CAAAAGACCA TGGAAAACTT AGAGCTTGAG 
CATCAAGAGT TAGCGGAGAA AACCAAAGCG TTTTCGATGT TAATAGAGAT GATCCTTCAG 
GATGCAGTTG TCCCACAAGA CATGTTTATT GCACAGTTAG AAGATTTCAT TGTGACCCAA 
AAACGCCACC TTGAGCTGGA AGAGCGCCAA ATCTTACCTC TAATTGAAGA GCTCTTTACT 
TCTGAAGATT GGCAGTACGT TGAAAGTTTA TGGCATGAGA ATGAAGACGA CCCAGTGTTT 
GGTAATACGA TTGCCGATCG CTACAAGCAG CTCGCCGATC GAGTACGTCA GAGTGACGCT 
GAGTTTGTCT AA
 
Protein sequence
MMIERIRREH GYMVRLLAIL RHKLNEIKQE HAINYALVSE IVDYLSNHSE KIHHLKEDIL 
YHYFLEHYGQ QKTMENLELE HQELAEKTKA FSMLIEMILQ DAVVPQDMFI AQLEDFIVTQ 
KRHLELEERQ ILPLIEELFT SEDWQYVESL WHENEDDPVF GNTIADRYKQ LADRVRQSDA 
EFV