Gene VIBHAR_00828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00828 
Symbol 
ID5553940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp816023 
End bp816700 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content44% 
IMG OID640906322 
Producthypothetical protein 
Protein accessionYP_001444056 
Protein GI156973149 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGC TTGTGTCTAG TCCTACCCTT ACCGACAAAG TTTCGAAAAT GATCTGTCAG 
GACATCCTGA CGGGTGAATT AAAACCAGGT CAAAAGCTTG TTGTTGCTGA GCTGAAACAG 
AAATACAACG TTGGTGCATC ACCTATCCGC GAAGCACTTG TGCAACTGTC TTGGAGCAAG 
TATGTCAAAC TTGAACCACA AAAAGGCTGT TGGGTTGCAC CTGTGTGCAG AAAAGAATTG 
AACGACCTAT ACGAGAGCCT CCGTGTGGTC TCTTCTGTAC TGCTTAAGAA AGCAATTTTA 
GCGGGTGATG AAAGCTGGGA GCTGGACGTG CTGACTTCAT ACCACAAGCT ATCACGCCTG 
AACTTTGATG AGACATTCTG CTGGAAAGAG TGGGAAGAGC GTCATCATCA ATTCCACGTT 
TCTCTGCTCG AAGGTGCCGA TTCAAAGAAC ATGTTTGAGT TCTTTAGCGA TCTGATTAAC 
CAAATCAAAC GCTACCGCTA TTTTGCAATG CAAGCGGTAA GCTCAGAGAA AGATGCCCTA 
TTCAACATTG ATGAGCATGA GATGATCATG AAGTTGGTAC TGGCAAAGAA CAGTGAAGAA 
GCCATGGATC TTTTAGATAA GCACTTACTG AGCTCAATGC AACGTATTGA AACGGTACTA 
GAGCTAGAGC CTGCTTAA
 
Protein sequence
MRLLVSSPTL TDKVSKMICQ DILTGELKPG QKLVVAELKQ KYNVGASPIR EALVQLSWSK 
YVKLEPQKGC WVAPVCRKEL NDLYESLRVV SSVLLKKAIL AGDESWELDV LTSYHKLSRL 
NFDETFCWKE WEERHHQFHV SLLEGADSKN MFEFFSDLIN QIKRYRYFAM QAVSSEKDAL 
FNIDEHEMIM KLVLAKNSEE AMDLLDKHLL SSMQRIETVL ELEPA