Gene VIBHAR_00772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00772 
Symbol 
ID5555615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp753372 
End bp754631 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content48% 
IMG OID640906266 
Producthypothetical protein 
Protein accessionYP_001444000 
Protein GI156973093 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTG TTGTAAAGCT CGCTTGGAAA AGCCTGATGA ACCGCAAAGC GACCGCTATT 
CTCACCATCA TGACGGTCGC CATTTCTGTT GTTCTACTAT TAGGCGTAGA GCGCATTCGA
ACCCAAGCCA AAGATAGCTT CGCTAATACT ATTTCTGGAA CTGACCTAAT TGTCGGAGGT
CGCTCAGGAC AAGTGAACCT GCTGCTGTAC TCAGTATTCA GAATCGGCAA TGCCACCAAC
AATATTGACT GGAAGAGCTA CCAAGAGTTT GCGAACCACC GAGCCGTCGA TTGGGCTATC
CCAATCTCGT TGGGTGATTC ACACAAAGGC TTTCGAGTGA TGGGCACCAA CCACAGCTAT
TTCGAACATT ATAAGTACGG AAGTAAGCAA CCACTCACAT TCTCAGAAGG CCGAGAATTC
AATGGCTTAT TTGAAACCGT ACTTGGCTCT GATGTTGCAA AACAACTCGG CTATAAAATT
GGTAGCGAGA TAATCATTGC CCATGGCATC AGTGATGTTG GCTTTAGTCG TCACGATAAC
TTGCCATTTA AAGTTGTCGG TATTCTGGCT CCGACAGGCA CGCCAGTGGA TAAAACCGTC
CACGTTTCCC TAGAAGCGAT TGAAGCAATT CACGTCGGTT GGGAAAGTGG CGCTCGCTTG
GGCCCGACAC CAAGTGCCGC AGACCTCAAA GCCAGAGATT TTCAACCAAA GCAGATCACT
GCGATGCTGG TCGGGTTGAA GTCACGCATC CAGACTTTTG CTCTGCAAAG ACAAATCAAC
ACTTATCCGA AAGAGCCACT TAGTGCCATC ATGCCGGGCG TCGCTCTGCA TGAATTATGG
GGAATGATGT CGGTTGCGGA ACAAGCACTG ATGGCAGTCT CAGGCTTTGT AGTCGTGGCA
GGTTTATTGG GTATGTTGAG TAGCTTGCTG ACCAGCTTAC AAGAACGCCG CCGTGAAATG
GCCATCCTGC GCGCAATGGG GGCAAGACCT AAACACGTCT TCTCGCTACT GATCAGTGAA
GCAAGTTTAC TCACGTTTGC TGGCATCATT ACCGGCGTTG CGTGCTTGTA TTCCATTCTT
GCCCTCTTGC AACCAATAAT CCAACAAAGT TATGGTATAC ACCTAACCTT AACGGCACTG
TCGCCGTATG AATGGATGTT GCTTGGCTTT GTACAGTGTG CAGGTATTGT GATTGGCTTC
ATCCCAGCAT TCCGTGCTTA CCGACAATCG CTCAGTGATG GAATGACAAT TAGGATTTAG
 
Protein sequence
MSAVVKLAWK SLMNRKATAI LTIMTVAISV VLLLGVERIR TQAKDSFANT ISGTDLIVGG 
RSGQVNLLLY SVFRIGNATN NIDWKSYQEF ANHRAVDWAI PISLGDSHKG FRVMGTNHSY
FEHYKYGSKQ PLTFSEGREF NGLFETVLGS DVAKQLGYKI GSEIIIAHGI SDVGFSRHDN
LPFKVVGILA PTGTPVDKTV HVSLEAIEAI HVGWESGARL GPTPSAADLK ARDFQPKQIT
AMLVGLKSRI QTFALQRQIN TYPKEPLSAI MPGVALHELW GMMSVAEQAL MAVSGFVVVA
GLLGMLSSLL TSLQERRREM AILRAMGARP KHVFSLLISE ASLLTFAGII TGVACLYSIL
ALLQPIIQQS YGIHLTLTAL SPYEWMLLGF VQCAGIVIGF IPAFRAYRQS LSDGMTIRI