Gene VIBHAR_00610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00610 
Symbol 
ID5554607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp595588 
End bp596082 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID640906105 
Productgeneral secretion pathway protein M 
Protein accessionYP_001443839 
Protein GI156972932 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA ACTTAATCGC ACAAGCTCAA ACTTGGTGGA GTAGTATCTC ACAGCGTGAA 
CAACGTTTGG TGATGGGCTG TGGCGCAATT GCTGTGCTAG GTATCATTTA TTGGGGCCTT 
TTGCAGCCAA TGAATCAACG AGCTGAATTA GCTCAGTCTC GAATTCAAAG TGAGAAACAA 
TTGCTAACTT GGGTACAAGA TAAAGCCGAT GATATTACCG CACTACGTAA AAGTGGCGGT 
GTTAGCTTTT CCAATCAACC ATTGAACCAA GTGGTGTCTT CATCTGCGCG CCGCTACAAA 
GTTGAATTGA TCCGTGTACA ACCGCGTAAT GATAGCGTTC AGGTGTGGAT TAAGCCTCTG 
GCATTCAATC AGATGGTGGA TTGGTTGCGT TATCTAAAAG AACAACAAGG GATTGAGGTG 
GAATTCCTAG ACATCGACCG TACTGAGCAA GCTGGTATGA TCGACGTAAA CCGCCTGCAA 
TTTAAGCGAG GTTAA
 
Protein sequence
MMKNLIAQAQ TWWSSISQRE QRLVMGCGAI AVLGIIYWGL LQPMNQRAEL AQSRIQSEKQ 
LLTWVQDKAD DITALRKSGG VSFSNQPLNQ VVSSSARRYK VELIRVQPRN DSVQVWIKPL 
AFNQMVDWLR YLKEQQGIEV EFLDIDRTEQ AGMIDVNRLQ FKRG