Gene VIBHAR_00546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00546 
Symbol 
ID5556313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp526622 
End bp527251 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640906041 
Producttransposase 
Protein accessionYP_001443776 
Protein GI156972869 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGAT CCCTCAGCCT CAAAGCCCAC GTTGCCAACA CATTTAGCCA ATACAATCAG 
CAAAGCCACA ACGTTCAGCT GCGCTACCCA TGTGCCCGTG AACAAGTACG CAATCAGTTC 
GATGAGCCCT CAATCAATCG AAGTATCGAT ATGGATTTAA ATGTCATCGC CTTTTACACC 
AAGGAATTAG CGAGCGTAGA ACACTTTATT GAAAAAACAG CCAAGCAGCA CAGCGCTCAA 
GATTACAACC TTATCCAGAC TGTGCCTGGT ATTGGTCGCA TTCTCGCCCT CACTATCTTG 
TATGAAATCG GCAATATTGA ACGCTTCCCG TCGGTGCAAA ACTTTGCCTC TTACTCACGG 
TTAGTCAAAT GCAAAGCTGA ATCAGCGGGC AAACAAAAAG GAACCAACGG AAACAAGATT 
GGGAACGCCT ACTTAAAATG GGCGTTCTCG GAAGCGGCGG TTCTTTATTT AAGAGGCAAT 
GAACCCGCCA AGAAATACAT TCAACGCTTG CAAAAACGCA TGAGCAAAGC CAAAGCGCTA 
TCAGCGTTGG CTCATAAACT GGGGCGATGT GTCTACTTCA TGTTAAGGAA CAAAACAGTA 
TTTGATGAGA AACGATTTTT ACCCCAATAA
 
Protein sequence
MWGSLSLKAH VANTFSQYNQ QSHNVQLRYP CAREQVRNQF DEPSINRSID MDLNVIAFYT 
KELASVEHFI EKTAKQHSAQ DYNLIQTVPG IGRILALTIL YEIGNIERFP SVQNFASYSR 
LVKCKAESAG KQKGTNGNKI GNAYLKWAFS EAAVLYLRGN EPAKKYIQRL QKRMSKAKAL 
SALAHKLGRC VYFMLRNKTV FDEKRFLPQ