| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00214 |
|---|
| Symbol | |
|---|
| ID | 5554327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 213680 |
|---|
| End bp | 214813 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640905710 |
|---|
| Product | hemolysin |
|---|
| Protein accession | YP_001443481 |
|---|
| Protein GI | 156972574 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGT TATCCATTTA TATATCTATT GCTATCGGCA TTTCGTTTAT CTGTTCGGTA
CTGGAGGCGG TACTTCTTAG TATCAGTCCG AGCTACATTG CGCAGCTCAA ACAACAGGGG
CACCCTGCTT CTGCTCAGTT AGAAAAACTG AAAGCAGACA TCGACCGACC ACTGGCTTCG
ATCCTGACGC TGAACACCAT TGCTCACACG ATCGGTGCTG CAACGGCAGG TGCACAGGCG
GCGGTAGTGT TCGGTAGCGA AGCGCTTGGT ATCTTCTCTG CGTTACTGAC ACTGGCGATT
CTTGTTCTAT CAGAAATCGT ACCTAAGACG ATTGGTGCAA CTTACTGGCG CCAACTTGCA
CCATCTGCGG CGGTATCGCT ACGCTGGATG GTATGGGCAC TAACACCATT CGTATGGTTC
TCTGAGCAAA TCACTAAGCG TCTAGCTCGT AACCACGAAG CACCAAAAAT GCGTGATGAG
CTGTCTGCTA TGGCTATTCT GGCAAAAGAA AGCGGTGAGT TCGCAGAAGG AGAATCAAAG
ATCCTAAGCA ACCTACTTGG TATTCAAGAT GTGCCAGTAA CACAAGTTAT GACTCCGCGC
CCAGTAGTAT TTCGCGTTGA CGCGACCATG ACCATCAATG ACTTTCTAGA GAAGCATAAA
GAGACGCCTT TCTCTCGCCC ACTGGTTTAC AGCGAGCAGA AAGACAACAT CATTGGTTTT
GTGCACCGTC TAGAGCTGTT CAAGCTGCAA CAATCAGGCA GCGGCCAAAA ACAACTTGGC
TCGGTCATGC GCCCTATCCA AGTGGTACTG AACAACACCG CTCTGCCTAA AGTGTTCGAC
CAGATGATGA CTCACCGCCT GCAGCTAGCG CTTGTGGTTG ACGAATACGG TACAGTACAA
GGCTTGGTAA CGCTAGAAGA CATCTTTGAG CACCTATTGG GTGAAGAGAT CATCGATGAA
GCGGATAAGA GCACTGACAT GCAAGAACTG GCTTACCAAC GCTGGGAAAG CTGGAAAGAA
AAGCACGGCG TAATTGAAAG CCGCGATGAC GATGAAGAAG AGGAAGAACT GGAGAAACAG
GACAAAGAGC CAGAAGCTCA AGAGCCAACC AAACCAGAAT CTAAAGAATC GTAA
|
|---|
| Protein sequence | MLLLSIYISI AIGISFICSV LEAVLLSISP SYIAQLKQQG HPASAQLEKL KADIDRPLAS
ILTLNTIAHT IGAATAGAQA AVVFGSEALG IFSALLTLAI LVLSEIVPKT IGATYWRQLA
PSAAVSLRWM VWALTPFVWF SEQITKRLAR NHEAPKMRDE LSAMAILAKE SGEFAEGESK
ILSNLLGIQD VPVTQVMTPR PVVFRVDATM TINDFLEKHK ETPFSRPLVY SEQKDNIIGF
VHRLELFKLQ QSGSGQKQLG SVMRPIQVVL NNTALPKVFD QMMTHRLQLA LVVDEYGTVQ
GLVTLEDIFE HLLGEEIIDE ADKSTDMQEL AYQRWESWKE KHGVIESRDD DEEEEELEKQ
DKEPEAQEPT KPESKES
|
|---|
| |