Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00163 |
Symbol | fumC |
ID | 5555228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 162587 |
End bp | 163972 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640905659 |
Product | fumarate hydratase |
Protein accession | YP_001443438 |
Protein GI | 156972531 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGG AATTCCGTAT CGAAGCGGAC AGCATGGGCG AAGTCAAAGT CCCTGCCAAC GCTTTGTATC AAGCCCAAAC TCAACGCGCT GTCGATAACT TTGCTTTTAG CAAACACACC ATGCCGACTG GCGTTATCCA AGCACTCGCC CACATCAAAC AAACCGCAGC GCTCACCAAT GCCCAACTTG GCTTGCTAGA AGGTGATGTT GCCAATGCCA TCGCCGATGC TGCGCAAGCC ATCATTGATG GTAAACACTT CGACCAATTC CCTATCGATG TATTCCAAAC CGGCTCAGGC ACCAGCTCAA ACATGAATGC CAACGAAGTG ATTGCAACAT TGGCGTCTGA GCACCTAGGC GGAATGGTCA ATCCAAATGA TCACGTCAAC ATGGGTCAAA GCAGTAACGA CGTAGTGCCT ACTGCGATTC AAGTTAGCTC TGCAATTGCG ATTGAAAAGC AGCTACTACC AGCACTGTCC CACCTAAGTG AAACACTAGA GACTAAGCAA CAAGCCCTGA AAGATGCGGT GAAAACAGGT CGTACGCACC TAATGGATGC GATGCCTATT ACCTTCACCC AAGAGCTTGG TGGCTGGCAG TTCCAAATCG AACACGCTAA ACAAGCTATT GAGCAAACAC TGCCAGCTGT GAAAGCATTA GCCCAAGGCG GAACAGCGGT AGGGACAGGG ATCAACGCCG ATCCACGTTT CGCCGATCTT TTTGCTGATA ACCTAACGCA ATCAACGCGC ATCGAGTTTG CTTCAAGCAA AAACTTCTTT TTCAATCTCA GTAGTCAGGA TGCGATCGTT GCCCTATCGG GACAGCTCAA AACAGCAGCA GTTGCGATCA TGAAGATCGC AAACGATCTT CGCTGGATGA ACTCAGGTCC ACTCGCAGGC TTGGGTGAAA TCGAACTGCA AGGTTTGCAA CCGGGCTCTT CTATCATGCC AGGCAAAGTG AACCCAGTGA TTCCAGAAGC AGCTGCTATG GCGTCTGCAC AAGTGATTGG TAACGACTCG ACCATTACCG TTGCCGGTCA ATCGGGTAAC TTCCAGCTAA ACGTGATGCT GCCAGTGATT GCTCACAATG TACTAGAAAG CATTGAACTG TTGTCGAACA GCGCCGTTGC TTTAGCAGAT AAAGCCATCG CGACGTTTGA AGTGCGCCAA GACAACCTTG ATGTGGCACT GGCGAAGAAC CCGATTCTGG TCACCGCACT TAACCCCGTG ATTGGCTACC TAAAAGCAGC CGAAGTAGCG AAGAAAGCCT ACAAACAAGG TCGCGCTATC ATTGATGTCG CAGAAGAAGA AACAGACTTG GATCGTGCAA CATTAGAAAG ACTGCTCGAT CCAGCCAAAC TGACTCAAGG CGGGGTGGCA GAATAA
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Protein sequence | MTTEFRIEAD SMGEVKVPAN ALYQAQTQRA VDNFAFSKHT MPTGVIQALA HIKQTAALTN AQLGLLEGDV ANAIADAAQA IIDGKHFDQF PIDVFQTGSG TSSNMNANEV IATLASEHLG GMVNPNDHVN MGQSSNDVVP TAIQVSSAIA IEKQLLPALS HLSETLETKQ QALKDAVKTG RTHLMDAMPI TFTQELGGWQ FQIEHAKQAI EQTLPAVKAL AQGGTAVGTG INADPRFADL FADNLTQSTR IEFASSKNFF FNLSSQDAIV ALSGQLKTAA VAIMKIANDL RWMNSGPLAG LGEIELQGLQ PGSSIMPGKV NPVIPEAAAM ASAQVIGNDS TITVAGQSGN FQLNVMLPVI AHNVLESIEL LSNSAVALAD KAIATFEVRQ DNLDVALAKN PILVTALNPV IGYLKAAEVA KKAYKQGRAI IDVAEEETDL DRATLERLLD PAKLTQGGVA E
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