Gene VIBHAR_00163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00163 
SymbolfumC 
ID5555228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp162587 
End bp163972 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content50% 
IMG OID640905659 
Productfumarate hydratase 
Protein accessionYP_001443438 
Protein GI156972531 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGG AATTCCGTAT CGAAGCGGAC AGCATGGGCG AAGTCAAAGT CCCTGCCAAC 
GCTTTGTATC AAGCCCAAAC TCAACGCGCT GTCGATAACT TTGCTTTTAG CAAACACACC
ATGCCGACTG GCGTTATCCA AGCACTCGCC CACATCAAAC AAACCGCAGC GCTCACCAAT
GCCCAACTTG GCTTGCTAGA AGGTGATGTT GCCAATGCCA TCGCCGATGC TGCGCAAGCC
ATCATTGATG GTAAACACTT CGACCAATTC CCTATCGATG TATTCCAAAC CGGCTCAGGC
ACCAGCTCAA ACATGAATGC CAACGAAGTG ATTGCAACAT TGGCGTCTGA GCACCTAGGC
GGAATGGTCA ATCCAAATGA TCACGTCAAC ATGGGTCAAA GCAGTAACGA CGTAGTGCCT
ACTGCGATTC AAGTTAGCTC TGCAATTGCG ATTGAAAAGC AGCTACTACC AGCACTGTCC
CACCTAAGTG AAACACTAGA GACTAAGCAA CAAGCCCTGA AAGATGCGGT GAAAACAGGT
CGTACGCACC TAATGGATGC GATGCCTATT ACCTTCACCC AAGAGCTTGG TGGCTGGCAG
TTCCAAATCG AACACGCTAA ACAAGCTATT GAGCAAACAC TGCCAGCTGT GAAAGCATTA
GCCCAAGGCG GAACAGCGGT AGGGACAGGG ATCAACGCCG ATCCACGTTT CGCCGATCTT
TTTGCTGATA ACCTAACGCA ATCAACGCGC ATCGAGTTTG CTTCAAGCAA AAACTTCTTT
TTCAATCTCA GTAGTCAGGA TGCGATCGTT GCCCTATCGG GACAGCTCAA AACAGCAGCA
GTTGCGATCA TGAAGATCGC AAACGATCTT CGCTGGATGA ACTCAGGTCC ACTCGCAGGC
TTGGGTGAAA TCGAACTGCA AGGTTTGCAA CCGGGCTCTT CTATCATGCC AGGCAAAGTG
AACCCAGTGA TTCCAGAAGC AGCTGCTATG GCGTCTGCAC AAGTGATTGG TAACGACTCG
ACCATTACCG TTGCCGGTCA ATCGGGTAAC TTCCAGCTAA ACGTGATGCT GCCAGTGATT
GCTCACAATG TACTAGAAAG CATTGAACTG TTGTCGAACA GCGCCGTTGC TTTAGCAGAT
AAAGCCATCG CGACGTTTGA AGTGCGCCAA GACAACCTTG ATGTGGCACT GGCGAAGAAC
CCGATTCTGG TCACCGCACT TAACCCCGTG ATTGGCTACC TAAAAGCAGC CGAAGTAGCG
AAGAAAGCCT ACAAACAAGG TCGCGCTATC ATTGATGTCG CAGAAGAAGA AACAGACTTG
GATCGTGCAA CATTAGAAAG ACTGCTCGAT CCAGCCAAAC TGACTCAAGG CGGGGTGGCA
GAATAA
 
Protein sequence
MTTEFRIEAD SMGEVKVPAN ALYQAQTQRA VDNFAFSKHT MPTGVIQALA HIKQTAALTN 
AQLGLLEGDV ANAIADAAQA IIDGKHFDQF PIDVFQTGSG TSSNMNANEV IATLASEHLG
GMVNPNDHVN MGQSSNDVVP TAIQVSSAIA IEKQLLPALS HLSETLETKQ QALKDAVKTG
RTHLMDAMPI TFTQELGGWQ FQIEHAKQAI EQTLPAVKAL AQGGTAVGTG INADPRFADL
FADNLTQSTR IEFASSKNFF FNLSSQDAIV ALSGQLKTAA VAIMKIANDL RWMNSGPLAG
LGEIELQGLQ PGSSIMPGKV NPVIPEAAAM ASAQVIGNDS TITVAGQSGN FQLNVMLPVI
AHNVLESIEL LSNSAVALAD KAIATFEVRQ DNLDVALAKN PILVTALNPV IGYLKAAEVA
KKAYKQGRAI IDVAEEETDL DRATLERLLD PAKLTQGGVA E