Gene VIBHAR_00138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00138 
Symbol 
ID5555002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp135603 
End bp136625 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID640905634 
Productlysine 2;3-aminomutase 
Protein accessionYP_001443413 
Protein GI156972506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCACA TAATAACCCG AAAAGTCGAA TCTGTTGAGC AAAACTGGCT CAAACAGTTA 
GCGAATGGGA TCTCTGATCC TGCAAAATTG CTGGAAATGT TGGAAATAGA TCCATCGCCA
TGGCAAGACG GGTTTGCTGC ACGCAAGCTG TTTGCACAGC GTGTACCGCA AAGTTTTGTC
GATAGGATGG AAAAAGGCAA TCCTTACGAT CCACTTTTGC GTCAAGTTTT ACCTTTGAGC
GAAGAGTTTG AGGTCCATGA AGGCTATTCC AATGATCCTT TGGAAGAACA AGACAACGAA
CTCCCTGGGT TGCTACACAA ATACCGCAAT CGCGCCTTAA TGATCGTGAA AGGTGGCTGC
GCGGTGAATT GCCGTTACTG CTTCCGTCGT CACTTCCCTT ATCAAGAGAA TAAAAGCGGC
AAGCAAGCAT GGATAAAGTG CTTAGAGTAC ATGGCGCAAC AACCAGAGCT GAACGAAGTG
ATCTTCTCTG GTGGTGATCC TTTGATGGCA AAAGACGATG AGATCCACTG GTTATTAGAG
CACATCGCAC AAATTCCACA CATCAAACGC CTGCGTATTC ACAGCCGTTT GCCAGTGGTA
ATTCCTGCTC GTATCACTGA TGAGCTATGC CAACGACTTC GCGCTTCTCG TCTGCAAATC
GTGTTGGTGA CGCACATCAA CCACGCTAAC GAAATCAACG CTGAATTTGC CGCTCAAATG
GCGAAGCTTA AGCAAGCCGG AGTGACCTTG CTAAACCAGG GGGTACTGCT GAAAGACGTC
AACAACAGCA TTGAAGCACA AGTTGCATTA AACGAAGCCT TGTTTGATGC GGGCATTTTG
CCTTACTACG TACACGTTTT GGATAAAGTC CAAGGTGCGG CGCACTACTT TGTTTCTGAT
GAAGAAGCCA AAACAATCAT GCGCGGTGTG ATCACGCGAG TTTCTGGCTA CCTAGTACCC
AAGCTAACCC GTGAAATTGG CGGTCGCCCA AGTAAAACAC CTCTGGATCT GCATCTAGAG
TAA
 
Protein sequence
MPHIITRKVE SVEQNWLKQL ANGISDPAKL LEMLEIDPSP WQDGFAARKL FAQRVPQSFV 
DRMEKGNPYD PLLRQVLPLS EEFEVHEGYS NDPLEEQDNE LPGLLHKYRN RALMIVKGGC
AVNCRYCFRR HFPYQENKSG KQAWIKCLEY MAQQPELNEV IFSGGDPLMA KDDEIHWLLE
HIAQIPHIKR LRIHSRLPVV IPARITDELC QRLRASRLQI VLVTHINHAN EINAEFAAQM
AKLKQAGVTL LNQGVLLKDV NNSIEAQVAL NEALFDAGIL PYYVHVLDKV QGAAHYFVSD
EEAKTIMRGV ITRVSGYLVP KLTREIGGRP SKTPLDLHLE