Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00083 |
Symbol | |
ID | 5555638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 85886 |
End bp | 86572 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640905579 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_001443370 |
Protein GI | 156972463 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAC AAGACATTAA ATTCATTGCC TTTGACCTAG ACGGTACTTT GCTTGATAGC GTACCGGATC TAGCGGTTGC GGCAGACCAA GCCGTTCAAG CACTTGGTTT TCCTTCTGTT TCAGAAGAGC AAGTCCGTGA TTATGTGGGC AACGGCGCAG ACGTGTTGAT CGGTCGTGCA TTGAGCCAGA GCTTAACCAT CAACCCAGAT CTGAATGCAG AGCTTCGTAC TAAAGCACGT GTACTGTTTG ATGACTACTA TGATCAAAGC GGTCACAAAC TAAGCCACCT TTACCCAACG GTAAAAGAGA CACTGGAAGA GTTACACAAA GCCGGCTTTG TTATGGCATT GGTAACCAAC AAGCCTTCGA AGTTTGTGCC TGATGTTTTA GAAAAGCACG ACATCGCAAA ATACTTTGTT GATGTGCTAG GTGGCGATGC GTTCCCAGAG AAAAAACCAA ACCCAATCGC ACTGAACTGG TTGATGGAAA AGCACCAAAT CCAACCAAGT GAAATGCTGA TGGTCGGTGA CTCGAAGAAC GACATTCTTG CAGCGAAGAA CGCAGGTTGC GCCTCATTTG GTCTGACTTA TGGTTACAAC CATGGCGAGC CAATTTCAGC GTCAAATCCA GATTTCGTCG CTGACAGTTT GGCAGAATTA TTGGACGTTG TAGCGGTTTC TGCATAA
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Protein sequence | MTQQDIKFIA FDLDGTLLDS VPDLAVAADQ AVQALGFPSV SEEQVRDYVG NGADVLIGRA LSQSLTINPD LNAELRTKAR VLFDDYYDQS GHKLSHLYPT VKETLEELHK AGFVMALVTN KPSKFVPDVL EKHDIAKYFV DVLGGDAFPE KKPNPIALNW LMEKHQIQPS EMLMVGDSKN DILAAKNAGC ASFGLTYGYN HGEPISASNP DFVADSLAEL LDVVAVSA
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