Gene VIBHAR_00083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00083 
Symbol 
ID5555638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp85886 
End bp86572 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content46% 
IMG OID640905579 
Productphosphoglycolate phosphatase 
Protein accessionYP_001443370 
Protein GI156972463 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAC AAGACATTAA ATTCATTGCC TTTGACCTAG ACGGTACTTT GCTTGATAGC 
GTACCGGATC TAGCGGTTGC GGCAGACCAA GCCGTTCAAG CACTTGGTTT TCCTTCTGTT
TCAGAAGAGC AAGTCCGTGA TTATGTGGGC AACGGCGCAG ACGTGTTGAT CGGTCGTGCA
TTGAGCCAGA GCTTAACCAT CAACCCAGAT CTGAATGCAG AGCTTCGTAC TAAAGCACGT
GTACTGTTTG ATGACTACTA TGATCAAAGC GGTCACAAAC TAAGCCACCT TTACCCAACG
GTAAAAGAGA CACTGGAAGA GTTACACAAA GCCGGCTTTG TTATGGCATT GGTAACCAAC
AAGCCTTCGA AGTTTGTGCC TGATGTTTTA GAAAAGCACG ACATCGCAAA ATACTTTGTT
GATGTGCTAG GTGGCGATGC GTTCCCAGAG AAAAAACCAA ACCCAATCGC ACTGAACTGG
TTGATGGAAA AGCACCAAAT CCAACCAAGT GAAATGCTGA TGGTCGGTGA CTCGAAGAAC
GACATTCTTG CAGCGAAGAA CGCAGGTTGC GCCTCATTTG GTCTGACTTA TGGTTACAAC
CATGGCGAGC CAATTTCAGC GTCAAATCCA GATTTCGTCG CTGACAGTTT GGCAGAATTA
TTGGACGTTG TAGCGGTTTC TGCATAA
 
Protein sequence
MTQQDIKFIA FDLDGTLLDS VPDLAVAADQ AVQALGFPSV SEEQVRDYVG NGADVLIGRA 
LSQSLTINPD LNAELRTKAR VLFDDYYDQS GHKLSHLYPT VKETLEELHK AGFVMALVTN
KPSKFVPDVL EKHDIAKYFV DVLGGDAFPE KKPNPIALNW LMEKHQIQPS EMLMVGDSKN
DILAAKNAGC ASFGLTYGYN HGEPISASNP DFVADSLAEL LDVVAVSA