Gene VIBHAR_p08216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_p08216 
Symbol 
ID5552719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009777 
Strand- 
Start bp43391 
End bp43993 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID640898093 
Productconjugal transfer protein TraB 
Protein accessionYP_001436083 
Protein GI156936732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCTTG AGTTGAGTGC GTTAATCCCT CTACTCAATA CCTGCCAAAG CCAAGTTGAC 
GCAAGCATCC TCAAACGTCT CATCGATAAT GAAAGCTCTC GTAATCCCTA CGCTATCGCT 
GTAGTCGGAG CCAAACCTGT TAATCAACCC AAGACCAAAC TTGAAGCCAT CCAAATTGCT 
ACCAATTTGG AGAAGCAAGG CTTTCAGTAC AGCTTGGGAT TGATGCAAAT CTACAAAGAG 
AACTTTCCCG CCTATGGCAT GACTATCGAA AGCGCATTTG ACGCTTGTAA AAGCATTGAG 
GTCGGAGCGG ATATTTACGC TAAGTGTTAC CACCGCGCAA AAGCGCAAGC ACCAAACAAG 
GCACACCAAC AACTACTTGA TGATGCCGCC TCTTGTTATT ACTCCAATAA CTTCACACGA 
GGTTATCAAA GTGAAGGAGA GAAAGGACTG AGCTACGTTG AGAAATTCAA CCGAGCAAAG 
AAACTCCCCT CCAACACCAT TTCGGAATCT TACGACTCAA CCTCTGAGTC TTCTCAACCT 
TCAAAACCAA CACCACCAAA GCAAGCCCAT TCATGGGATG TCTTTGGTGA CTTCTCTTAT 
TAA
 
Protein sequence
MLLELSALIP LLNTCQSQVD ASILKRLIDN ESSRNPYAIA VVGAKPVNQP KTKLEAIQIA 
TNLEKQGFQY SLGLMQIYKE NFPAYGMTIE SAFDACKSIE VGADIYAKCY HRAKAQAPNK 
AHQQLLDDAA SCYYSNNFTR GYQSEGEKGL SYVEKFNRAK KLPSNTISES YDSTSESSQP 
SKPTPPKQAH SWDVFGDFSY