| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08210 |
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| Symbol | |
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| ID | 5552725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 38518 |
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| End bp | 39468 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640898087 |
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| Product | conjugal transfer protein TraA |
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| Protein accession | YP_001436077 |
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| Protein GI | 156936726 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATC GACTATTCGA CTTTGTTCAT CTGATAACAC AGGAAAATAT AGCCAGTTTT
GTTGGGATCT TTACAGCCAC AATCACGCCT CTAATTGGGG CGTGTGTTGT TTTATATGCT
ATCTACCTTG CGTTTCAAGC GCTCTATGAT GCTGAAAACA TGATGATAAT GGAGTCGTTA
AAATTCATAG CTTCATTAGC ATTGTGTACC ACCGTAGCGT TTAACACGTC GTGGTACTTG
AATAGCATTG TTCCTATGGT TTATTACTCA GGTGATGATA TTGCTAACGC GATGCTTGGC
TCAACTGGCA GTGGTTCTCT CCAAACAATG TTCGACACTA TGTTGAAACA ATTTGCTGAT
ACATGGGGGG AGGTTAGTTT TGGTATGTCG GATTCGTGGG GGCAATCGAT ATACTTTATG
CTGTTAGCCT TTCTGATATT GATTGGCTAT CTCCCTTTTA TTGTTGTAGC GACCGCCTAT
CTGCTTATTG CTAAAGTAAT GGTCAGCTTC CTTCTTATCC TCGGTCCATT GTTTATCATG
TTCGCTTTCT TTCCCTCAAC GCGAGACATG TTCAAAACAT GGACTGGGCA ATGTTTAAAC
TATGTACTAT TGGTTGTGGT TTACCCGATT GCTTTCAATC TTTTCACAAG AACTCTCGAA
CACGTTATTT TTGGTGGTAG CGCTACTGCA ATTGGACTCT CAACAGTGAT AATGACCATC
ATCTTATTTG GTTGTTGCAT CTTAATCTCC GTCCAAATAC CTGTGTTCTG TTCATCCCTA
TCGGGTGGCG TTGGTATTAA CGGCTTAGTC AGCAATATGG GAATGGGTAT GCGAAGCCTC
AGTAACGCCG CTAAAGGTGG CGCAGGAGCA GCCAAACGCG CAGGACAAGG CACGTACAAT
GGTGCTAAGT CATTGGGCGA TAAGTTCAAA AACCGAATTA GACCAGGCTA A
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| Protein sequence | MFDRLFDFVH LITQENIASF VGIFTATITP LIGACVVLYA IYLAFQALYD AENMMIMESL
KFIASLALCT TVAFNTSWYL NSIVPMVYYS GDDIANAMLG STGSGSLQTM FDTMLKQFAD
TWGEVSFGMS DSWGQSIYFM LLAFLILIGY LPFIVVATAY LLIAKVMVSF LLILGPLFIM
FAFFPSTRDM FKTWTGQCLN YVLLVVVYPI AFNLFTRTLE HVIFGGSATA IGLSTVIMTI
ILFGCCILIS VQIPVFCSSL SGGVGINGLV SNMGMGMRSL SNAAKGGAGA AKRAGQGTYN
GAKSLGDKFK NRIRPG
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