| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08206 |
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| Symbol | |
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| ID | 5552729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 35589 |
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| End bp | 36782 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640898083 |
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| Product | conjugal transfer protein |
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| Protein accession | YP_001436073 |
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| Protein GI | 156936722 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.0354612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG ACAACACCAT CCCAAGCGCT TATGAAAGCG CCAACCTCGA CCGTGGCGAG
CTCACGGTGA GCGGTCGTAA AAAGAAAAAC AAAGCGGTCA TTGTGATCGC TTTGGTGATC
CTCTCTTTGG TCGTCGTCGC TGTGGGAGTT CTGTTCGCAA TTAATCAATT TCGTGAAGCG
GAAGTGGAAA CAAAGCCCCT ACAGCCAGAG TCTACTGCCG AGGTGATTGG CGTTGAAAAA
GGCACAGTCG GCAACGACAG TGCTTGGTTT GAGAAAGCCA AGCGTGACCA TGAAAAAGAC
AAGGCGCAGC AAGAGCGCGC CGCACAGTGG AAACGAAAAC AAGAGCTCAA GCAAGCCAAA
GCGCAAGCAA CGCAGCAGCA ACCTGTCACT GTGCCTAAAA CGGACGTTCC TGAGCCCAAT
GTCGCAAAGC AACCTTCCGC CACATCAAAG CGAGGCAAGA AAGCACCACC GACTCCACAA
GAGCGTCGCT TAATGGGTAG CCTCATGGTT AACGTTGAAA GCGGCAATGC CGCCAGTAGC
CAAAGTACTA CTGAACCTGC CTCTTACGAC AACAGCTATG ACGCACCGAC CTTCGCGATG
GGTCACGCCG CCAAGCGCAA GCAAGGAGGA TTAGATTTTC TGCTGAAACA TGGCTCAATC
ATTCCTTGTG CACTCTACAG TCAGGTCATC TCTGACTATC AGGGCATTGT GATGTGTCGC
GTCACTCAAG ATGTGTACAG CGCCAATGGT AAAGCCTTAT TGGTAGAGCG AGGTTCAATG
CTCACGGGTT CGCAGAATGT TCAGTTAGAA GCAGGGAAAA ACCGCGTATT CACAACATGG
GCTGATATCG AGACGCCGAA CGGGATAGCC ATTCGTATCG ATTCACTGGG TGCAGGTCGC
CTCGGCGCAA GCGGTAACGA GGCTTGGGTC GATAATCACT TTAAAGAGCG CTTTGGTGGC
GCAATTTTAC TGTCCTTCCT CGACGATGCT TTTGGCGCAC TCGCAGAAAA AGCCGCTTCA
TCGGATGGGG ATATTACCTT TGATAGCTCA ACCGAGAACG CCAGCAACAT GGCAGAGAAG
GCTCTAGAGA GCAGCATCAA TATCTCACCA ACGGGTTACA CCCAAATCGG TCAACGCATC
AACATCATTG TTGCTCGCGA CATTGATATG TCGAGTGTGT ACGCCTTCGA GTAA
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| Protein sequence | MSDDNTIPSA YESANLDRGE LTVSGRKKKN KAVIVIALVI LSLVVVAVGV LFAINQFREA
EVETKPLQPE STAEVIGVEK GTVGNDSAWF EKAKRDHEKD KAQQERAAQW KRKQELKQAK
AQATQQQPVT VPKTDVPEPN VAKQPSATSK RGKKAPPTPQ ERRLMGSLMV NVESGNAASS
QSTTEPASYD NSYDAPTFAM GHAAKRKQGG LDFLLKHGSI IPCALYSQVI SDYQGIVMCR
VTQDVYSANG KALLVERGSM LTGSQNVQLE AGKNRVFTTW ADIETPNGIA IRIDSLGAGR
LGASGNEAWV DNHFKERFGG AILLSFLDDA FGALAEKAAS SDGDITFDSS TENASNMAEK
ALESSINISP TGYTQIGQRI NIIVARDIDM SSVYAFE
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