| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4393 |
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| Symbol | |
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| ID | 5541906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5646494 |
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| End bp | 5647606 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896493 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001434429 |
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| Protein GI | 156744300 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.354344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.201338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA AGCGCGACTA TTACGAAGTG CTGGGCGTTC AGCGCAACGC CTCGCAGGAC
GAGATCAAAA AGGCGTTTCG CCGCCTGGCG CGGCAGTACC ATCCCGACGT CAATAAGGCG
CCGGACGCCG AGGCGAAATT CAAGGAGATC AACGAGGCGT ATGAGGTGCT GTCCGACCCG
GAGAAGCGCA GTATGTATGA TCGGTTCGGT CATGCCGGTC CGACTGCGGC GCCGGGGTTC
GATCCCTTCG CCAGCGCCGA TCCGTTCAGT TCGATCTTCG AGACGTTCTT TGGCGGCACG
ATGCGCGGGA CGCAGCGCGG TCCACAACGC GGCGCCGATC TGCGCTATAC GCTGTCGATC
TCGTTTGAGG AGGCGATCTT CGGCGTTGAA AAGACGATTG AGTATCGCCG AATGGAAACC
TGCCCGGCAT GCCGCGGCAG CGGCGCCGAA CCGGGCACCG AGCCGGTGCG CTGCCCGAAG
TGCGGCGGTC TCGGCGAAAT TCGACAACGC GCGCCGCTCT TCAATATGGT GACGGTGACG
ACCTGCGATA TGTGTCGCGG TGAGGGGACG GTCATCGCTA TTCCATGCCG TGAATGCCGG
GGTGAGGGGC GCATCCGTCA GACGCGCAAA ATCACGGTGC GTGTGCCTCC TGGCGTTGAT
AGTTCCGCGC AAATCCGGAT CAGCGGCGAG GGAGATGCCG GTCCGCGTGG CGGTCCGTAT
GGCAATCTCT ATGTTGTCAT CGACGTTCAA CCGCATCCGT TCTTCATCCG CGAAGGCAAC
GACATCATTC TCGAATTGCC GCTCAATGTC GCGCAGGCGG CGCTGGGGAC CGAGGTCGAT
GTGCCGACTA TCGAGGGTAC GGAGCGTCTG CATATTCCGC CCGGCGTTCA GAACGGCGCA
GTGTTCCGCA TTCGAGGGAA AGGCGCGCCG TTTCTCCGCA GTAGTGGTCG CGGTGATCAG
ATTGTGGTGG TGCGCGTCGT TGTGCCAACC AATCTGAACG ACCATCAACG CCGGTTGTTT
GAAGAACTTG CGCGCTCGCT CGAAAATGAG CCGATTGGCA ATCAGCGTGA TGAGGGTTTC
TTCGGGCGCA TTAAGAATGC GCTCGGTCTG TAA
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| Protein sequence | MAVKRDYYEV LGVQRNASQD EIKKAFRRLA RQYHPDVNKA PDAEAKFKEI NEAYEVLSDP
EKRSMYDRFG HAGPTAAPGF DPFASADPFS SIFETFFGGT MRGTQRGPQR GADLRYTLSI
SFEEAIFGVE KTIEYRRMET CPACRGSGAE PGTEPVRCPK CGGLGEIRQR APLFNMVTVT
TCDMCRGEGT VIAIPCRECR GEGRIRQTRK ITVRVPPGVD SSAQIRISGE GDAGPRGGPY
GNLYVVIDVQ PHPFFIREGN DIILELPLNV AQAALGTEVD VPTIEGTERL HIPPGVQNGA
VFRIRGKGAP FLRSSGRGDQ IVVVRVVVPT NLNDHQRRLF EELARSLENE PIGNQRDEGF
FGRIKNALGL
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