| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4390 |
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| Symbol | |
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| ID | 5541903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5642910 |
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| End bp | 5643989 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896490 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001434426 |
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| Protein GI | 156744297 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.320448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG ATCTGACCGA TCGCCGCCAG CTGATCCTGA AACTGGCGAT CCAGGAGTTC
ATTGAGAGTT CGCAGCCGGT GGCCTCGGAG TTGCTGGTGC GCAAATATCG GCTCAATGTA
TCGCCTGCGA CCGTGCGGAA TGAACTGGCG GCACTGGAAG AGTTGGGCTA TCTGACGCAC
CTGCACACAT CGGCCGGGCG TGTGCCGACC GATGCAGGGT ATCGCTATTT CGTCGAGAAC
CTGATGGATC GCACACCGCT GTCGGCAACT GAGCAGCGCA CCATCCGACA CCAGTTTTAC
CAGGTGCGCA GCGAACTCGA CCAGTGGATC CAACTGGCGG GCGCTGTGCT GGCGCGCACT
GCGCAGAACG CCTCGGTCGT CACGCCGCCG CGCGCGCAGC AGGCGCGCCT GAAACACCTG
GAGTTGATCT CGATCCACGA CACAACGGCG CTCATGGTGC TGGTGCTGCA CGATGGCACC
ATTCGTCAAC AGACGCTCAC GCTCGATATG GCGCTCTCGC AGGAGGAATT GAGTCGCCGT
GCATCGCGTA TCAACGAACG TTGCGCCGAT GCGCCGGTGG AGCGGGTCGA GGAGTTTCTC
AAGCAGGAAC GCGCCCATGA GCCGCCAGGC GGCGATGCGC TCGCCTGTCA GGTGCTCGAC
CTGATCGTGA AGGCGATGCA CCAGTTCAAT GAGCATCTGA ACAGCGATAT TCATAGCGAT
GGACTGATCG AGATTTTGAA CCAGCCAGAG TTCTCGCAGG TCGAACGGGT GCGCCGAATG
ATCGAGATTC TGCAAAGCCG ACGCGCGCTC GGCACGCTCA TTCCGCGCGC GCTTTCCAGC
AGCGGCGTGC AGGTGGTGAT CGGCGGCGAG CATAGTTATG ATGAAATGCG CGAGTATAGC
GTCGTGCTGT CGCGCTACGG CGGCGGCGAG ATTGTCGGCG TGCTCGGCGT GATTGGTCCG
ACGCGCATGG CATATCCACG CGCTATTTCG GCGGTGCGCT ATATTTCCGC CGTGATGAGC
GACCTGCTGG CGGAACTCTA TGGGATTGAA GGAGATACCC ACTGGGAAGT GGAATCCTGA
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| Protein sequence | MTTDLTDRRQ LILKLAIQEF IESSQPVASE LLVRKYRLNV SPATVRNELA ALEELGYLTH
LHTSAGRVPT DAGYRYFVEN LMDRTPLSAT EQRTIRHQFY QVRSELDQWI QLAGAVLART
AQNASVVTPP RAQQARLKHL ELISIHDTTA LMVLVLHDGT IRQQTLTLDM ALSQEELSRR
ASRINERCAD APVERVEEFL KQERAHEPPG GDALACQVLD LIVKAMHQFN EHLNSDIHSD
GLIEILNQPE FSQVERVRRM IEILQSRRAL GTLIPRALSS SGVQVVIGGE HSYDEMREYS
VVLSRYGGGE IVGVLGVIGP TRMAYPRAIS AVRYISAVMS DLLAELYGIE GDTHWEVES
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