| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4354 |
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| Symbol | |
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| ID | 5541867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5606188 |
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| End bp | 5606880 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896460 |
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| Product | ABC transporter related |
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| Protein accession | YP_001434396 |
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| Protein GI | 156744267 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG CTGTTCCCAT CCCTGCGGTG CGCGTCACCA ATGTCACGCG CGCCTATATG
GTCAATAACG AACGGGTGCT CGCGCTGCGC CATGTGAACC TGACCGTTGA GGAGGGCGCG
TTTGTGGCGC TTATGGGGCG CTCCGGCTCT GGGAAAACGA CGCTCCTCAA CATGATCGGC
GGGCTCGATC AGCCGACGGA AGGGGAAGTT GCGCTCTTCG GGCAGGTGTT GAACGGCATG
GATCAGGATC AATTAACGCT GCTGCGCCGC GAGAAGATCG GGTTCATCTT TCAATCGTTC
GCCCTGCTCC CGATTCTCTC AGCATGGGAG AATGTCGAGA TGCCGCTGCG GATCGCGGGG
GTGCGTTCCG GTCGTGAGCG GCGGCAGCGC GCCGAGGCGG CGCTGGCGCT GGTCGGTCTC
GAACGGTGGG CAACGCACCG TCCTGCTGAA ATGTCGGGCG GGCAACAGCA ACGGGTTGCT
ATTGCCCGCG CACTCGTATC GCGCCCGCGC CTCCTGCTGG CAGATGAGCC AACCGGTGAA
CTCGACTCGA CGACAGGGCG GAATCTGCTC ACGCTGCTGC GCACCATTGT GCGCACCGAA
GGCGTGACCC TGATCATGGC AACCCACGAC CGGACGATCT TCGATTTCGC CGATATCGTC
TATCAACTGC GCGACGGGCA GATCGTGGAA TGA
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| Protein sequence | MSTAVPIPAV RVTNVTRAYM VNNERVLALR HVNLTVEEGA FVALMGRSGS GKTTLLNMIG
GLDQPTEGEV ALFGQVLNGM DQDQLTLLRR EKIGFIFQSF ALLPILSAWE NVEMPLRIAG
VRSGRERRQR AEAALALVGL ERWATHRPAE MSGGQQQRVA IARALVSRPR LLLADEPTGE
LDSTTGRNLL TLLRTIVRTE GVTLIMATHD RTIFDFADIV YQLRDGQIVE
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