Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4345 |
Symbol | |
ID | 5541858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5597810 |
End bp | 5598574 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896451 |
Product | chromosome segregation and condensation protein ScpA |
Protein accession | YP_001434387 |
Protein GI | 156744258 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.331059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATCG AACCAATCGA TTACACCGTT ACCCTACCGA TCTTTGAAGG TCCTCTCGAT CTGCTGTTGC GTCTGATCGA ACGCGAAGAA CTCGATGTGA CCGGCGTGGC GCTGGCGCAC GTCGCCGATC AGTATCTTGC CCACGTGCGC ACGATGGACG CGCCGGATCC GGCGTCGCTC TCGGCGTTTC TGGTTGTGGC CGCACGTCTG ATGCTGTTGA AGTCACGGGC GTTATTGCCG CGTCCCTCGA TTATCAGCGA TCAGGAACCC GACGACGAAG GCGAATCGTT GGTGCGTCAA TTGCAGGAGT ATCAGCGTTT CAGGCGGTTG GCGGCGCTCC TGCGACGCTC CGAGGGCCAG CGTATGTATC CACGGCTCGC TATGCCACCG GCGCCCCGCC CCGCGCGGCT CGACCATACC ATCGCCGATC TGATTGCTGC CATGCAGCGT CGTATGCAAT TGATGCTGCC GCTCGATCCG CCGCCGATGA CACTGCCTGC GCCAAAAATG GTCACGGTCG GCGAGATGAT CGATCGCATT CGTTCATACT TACAGGAGCG TCCATGGGTT GCATTCGAGG AGATGATCGC GCTTGCCGCA CACCGTGTCG AGATCGTCGT TGCGTTCTGG GCGGTCCTGG AATTGTGGAA GCGCCATGTT GTCGTGGTCG AACAGGCTGG TTTGTTCGGC GTCATCGTGA TCCGGCGGGG AGTGTTGTTT GGGAAAGAAG AACTAAGAAC TGAGACCCGA GAACTGACAG GTTAG
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Protein sequence | MFIEPIDYTV TLPIFEGPLD LLLRLIEREE LDVTGVALAH VADQYLAHVR TMDAPDPASL SAFLVVAARL MLLKSRALLP RPSIISDQEP DDEGESLVRQ LQEYQRFRRL AALLRRSEGQ RMYPRLAMPP APRPARLDHT IADLIAAMQR RMQLMLPLDP PPMTLPAPKM VTVGEMIDRI RSYLQERPWV AFEEMIALAA HRVEIVVAFW AVLELWKRHV VVVEQAGLFG VIVIRRGVLF GKEELRTETR ELTG
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