| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4295 |
|---|
| Symbol | |
|---|
| ID | 5541806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5538882 |
|---|
| End bp | 5539652 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640896401 |
|---|
| Product | hydrolase |
|---|
| Protein accession | YP_001434339 |
|---|
| Protein GI | 156744210 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.558017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGCCC AATGTGGCGG TGAGACGCGC CCGCGCAGGG GTCCTAACCC AGAATCCCCC
CAATCCTTTA TGATCGATAC CATCGCATTT GACGCCGACG ATACGCTCTG GCACAACGAA
CACCTCTATT CGCTCACGCA GGAGAAATTC AAACGCCTGC TTGCGCCTTT TCAGGATGCC
GCAACAATCG AGCGACGATT GTATGCAACC GAGATGCGCA ACCTAGCGTT CTTTGGCTAT
GGAATCAAAG GGTTTACCCT GTCGATGATC GAAACCGCAA TTGATCTCAC CGAGGGGCGA
GTCGGAGCGC ATGAGATTCG CCAGATCATC GACTTTGCCC GCGATATGGT GCGCGCGCCG
GTCGAGTTGC TGCCGGGGGT GCGTGAAACG ATTGCGTCAC TCAGCGCCTC ATACCGACTG
ATGGTGATTA CCAAAGGCGA TCTGTTTGAT CAGGAAAGCA AGATTGCGCG CTCCGGCATC
GCTGATTATT TCCAGCATAT CGAGATCGTC AGTGAAAAGA CGCCTGAGAC CTATGCCGCT
GTGATGAGGC GATACCACAT TGAACCGCCC CGTTTCCTGA TGGTTGGCAA TTCGCTAAAA
TCTGATATCC TACCGGTGGT TGCAGTTGGA GGGAATGCCG TGTATATTCC ATACCACCTG
ACCTGGGAAC ATGAACGTGT GACTGATGAA GGAGTGAACG CCGGCGGATA CGTGACGGTA
TCACGCATCA GTGAACTGCC GGCCTGGCTG GCGCGATTGT CTGCCATTTG A
|
|---|
| Protein sequence | MVAQCGGETR PRRGPNPESP QSFMIDTIAF DADDTLWHNE HLYSLTQEKF KRLLAPFQDA
ATIERRLYAT EMRNLAFFGY GIKGFTLSMI ETAIDLTEGR VGAHEIRQII DFARDMVRAP
VELLPGVRET IASLSASYRL MVITKGDLFD QESKIARSGI ADYFQHIEIV SEKTPETYAA
VMRRYHIEPP RFLMVGNSLK SDILPVVAVG GNAVYIPYHL TWEHERVTDE GVNAGGYVTV
SRISELPAWL ARLSAI
|
|---|
| |