| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4291 |
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| Symbol | |
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| ID | 5541802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5533395 |
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| End bp | 5534282 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640896398 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001434336 |
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| Protein GI | 156744207 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0396513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGCGC CAGAACTCTT TGTTGCCAGC GTCACACCCT TCACATCGCC TTCGGGCGCT
GTCGATCACG ATTTCATCAT CAGGCATTTG CGCTGGTTAG AGGCGCAGGG TGTCGATGGC
GTCGTGCCGT GCGGGACAAC CGGCGAAGGT CAGTCGTTGA GCGTTGCCGA GCGGATGGCC
ATCTTCGACA CGGTGATGCG CCATCGTGAA CGGTTGCGGG TGTTTGCAGG AACCGGCTGC
GCTGCGTTGA GCGACACCAT CATCCTGACA CGCTATGCGA TCGAGCGCGG CGCCGAGGCG
GCGCTGGTGT TGCCGCCATT CTATTTCAAG AATCTGAGCG ACGCCGGTTT GCTCGGATAC
TACCGCGCGC TGTGCGATGC GCTGCCGTCT GGCGCGCGCC TGATCCTGTA TCATATTCCG
CCAATGAGCC AGATTCCTGT CACTCCCGCT GTTATCGAGG GGCTTTATCA GAGCCATCCG
CATATGGTGT ACGGCGTGAA GGACAGCAGC GGCGATCCTG CTTATCTGGC GATGCTGACG
CAGCGATTCC CCACATTGCG CGTGTACGTC GGAAGCGCGG CGCTGCTCGC ACAGGCGTTG
CGCGACGGTG CGACAGGCGG GATATTTGCG CTGAGCAATG TCTTCCCGCG CGAGATGCGC
GCCGTCATGA CCGCACATCT GACCGGCGGC GATGTGGAAA CGGCGCAGCG GTTGGTGACG
GCGCTCAGTC AGGCGCTAAA GCCGTATGGC AACCCACCGG CAATCAAGGC GCTGCTGGCG
CGCCTCACCG ATCTGCCGCG CGCCTCATCT CGCTTTCCGC TTGTCGATCT GACTCCCGAC
GACGCTGAGA CGCTGTGGAC GGCAGTGCGG AAGGTCGAAG CGACGTGA
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| Protein sequence | MVAPELFVAS VTPFTSPSGA VDHDFIIRHL RWLEAQGVDG VVPCGTTGEG QSLSVAERMA
IFDTVMRHRE RLRVFAGTGC AALSDTIILT RYAIERGAEA ALVLPPFYFK NLSDAGLLGY
YRALCDALPS GARLILYHIP PMSQIPVTPA VIEGLYQSHP HMVYGVKDSS GDPAYLAMLT
QRFPTLRVYV GSAALLAQAL RDGATGGIFA LSNVFPREMR AVMTAHLTGG DVETAQRLVT
ALSQALKPYG NPPAIKALLA RLTDLPRASS RFPLVDLTPD DAETLWTAVR KVEAT
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