Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4272 |
Symbol | |
ID | 5541783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 5514235 |
End bp | 5514864 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640896379 |
Product | hypothetical protein |
Protein accession | YP_001434317 |
Protein GI | 156744188 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.396078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCAC AACCAGAGCT CTCCGGTGAA GCGCTCGACT CCGACGAGAT GGAGAGCCGT AGTCTTGTTT TTGCCCGGTT GTTATCGCAT ATTTTCAACC CGGTTTTCGT CACTATCACT GCCTATCTGT TGATCGGTCT TCACACCCTG GACGAGGCGG GGCTTGCGTG GGTTGGCGGC ATTATCGCTT TTCAAACGGC GCCATCGGTG CTGTATTATC TGGTGCGCTT GCGTCAGGGA GGGTTCAGCG ATGCCGATGT GTCGGTGCGA CATGAGCGCA ATGAACTCTA CATGTTTGGC ACGGTGTCGG TCCTGCTGAC GATTGGGCTG TTGCTGGCGC TAGACGCGCC ACGCCCGTTT CTGGCGCTGA CGGTTGGCAT GCTGGGCATT GGCATTGTCT GCGGTTCGAT CAATCTGATC TGGAAGATCA GCATGCACGG TGCAGCTATA GGCGCGCTGG CGACGCTGGC GCTGATCTAC TCAAATGCGT TGGGGATTGC GTTCTGGATA TGCGCCGTCG CCGTCGCCTG GGCGCGAGTG CGAACGCGCA ACCATACGCC AGGGCAGGTG ATCGCCGGCC TGGCTGTCGC TGCGATAGTC GTCAGCGTGT CGTTTCTAGC ACTGGCGTGA
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Protein sequence | MRPQPELSGE ALDSDEMESR SLVFARLLSH IFNPVFVTIT AYLLIGLHTL DEAGLAWVGG IIAFQTAPSV LYYLVRLRQG GFSDADVSVR HERNELYMFG TVSVLLTIGL LLALDAPRPF LALTVGMLGI GIVCGSINLI WKISMHGAAI GALATLALIY SNALGIAFWI CAVAVAWARV RTRNHTPGQV IAGLAVAAIV VSVSFLALA
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