| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4269 |
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| Symbol | |
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| ID | 5541780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5510919 |
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| End bp | 5511872 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640896376 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001434314 |
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| Protein GI | 156744185 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.39074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATC TCATAACGGG TGGAGCAGGA TTCATCGGCA GTCACCTGAG CGAGGCGTTG
CTGGCGCGCG GCGATCAGGT GGTGTGCATC GACAATTTCA ACGACTATTA CGATCCGGTT
CGGAAGCGAC GCAATATCGC GCGCGCGCTG GCGCACCCCG GCTATACGCT GGTCGAGGCG
GATTTTCGAG ACGCGGAAAT AATGGATCGC GTCTTCGCGC AGTATCGACC ACAGCGGGTA
GCGCACATCG GCGCAATGGC GGGTCCGCGC CCATCGATGC GCAATCCTGC GCTCTACGAA
GAGGTCAATG TTCGCGGCAC GCTGACCATC CTGGAAACGG CGGCGCGGTA CGAGGTCGAG
GGGTTGGTGC TGGCATCAAC ATCATCGGTG TACGGCATGT CGCCAACCCC ATGGTCAGAG
GAGTCGCCGA CCGACCGACC CCTGTCGTAC TACGCTGCCA CGAAAAAAGC AGCTGAAGTG
CTGGCATACA CAGCGCACCG CCAGTACGGT ATGCCAATAC GCATTGTGCG CTTCTTCACC
GTGTACGGTC CGCGCGGTCG GCCCGATATG ACGCCACACT TATTCGTTGA TGCAATGGTC
GCCGGAAAAT CGATAACCTT GTTCAATGGC GGCATGGGCG TCTACCGCGA CTGGACCTAT
GTTGATGATA TTGTGTCTGG TGTGGTCGCA GCGCTCGATG CCGGGTACGC CTTTGACATT
TTCAATTTAG GGCACTCAAG CCCGGTGCAG TTGATCGATT TCGTCACTGC TCTGGAACGG
GTGACCGGTT TGTGCGCCAG GATTGTGGCA CAACCGCTGC CAGCCGCAGA CCCGCCGATC
ACCTATGCCC GAATTGACAA GGCGACGCGG ATGCTTGGAT TTCAGCCGTG TACGCCGCTG
GAAGAAGGGC TGGCACGCTT TTGGGAGTGG TACCGGAGCG AGCATGGCGC CTGA
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| Protein sequence | MRYLITGGAG FIGSHLSEAL LARGDQVVCI DNFNDYYDPV RKRRNIARAL AHPGYTLVEA
DFRDAEIMDR VFAQYRPQRV AHIGAMAGPR PSMRNPALYE EVNVRGTLTI LETAARYEVE
GLVLASTSSV YGMSPTPWSE ESPTDRPLSY YAATKKAAEV LAYTAHRQYG MPIRIVRFFT
VYGPRGRPDM TPHLFVDAMV AGKSITLFNG GMGVYRDWTY VDDIVSGVVA ALDAGYAFDI
FNLGHSSPVQ LIDFVTALER VTGLCARIVA QPLPAADPPI TYARIDKATR MLGFQPCTPL
EEGLARFWEW YRSEHGA
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