| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4259 |
|---|
| Symbol | |
|---|
| ID | 5541770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 5501070 |
|---|
| End bp | 5501600 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640896366 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_001434304 |
|---|
| Protein GI | 156744175 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.548408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CGATTGTGGC GCTCGCCGGT AATCCAAATG TCGGCAAAAG CACGATCTTC
AATGCGCTGA CCGGTCTGCG GCAGCACGTC GGCAACTGGC CCGGCAAAAC TGTTGAACGG
AAAGAGGGAC AACTGCTCCT CGACGGTCGG GTGGTCACGA TTGTCGATCT TCCCGGCGCG
TACAGCCTGG CATCGCGTTC GCTCGAGGAA CAGATCGCCC GCGACTTCAT CGTGCGCGAT
CGTCCCGATC TTGTGATCAA TGTCGTGGAC GCGGCAAACC TGGAGCGCAA CCTGTATCTG
ACGGTGCAAC TGCTTGAAAC CGGTGTGCCT CTTCTGGTCG CGTTGAACAT GACGGATGTG
GCAGCAGCGC GCGGTATGAC GCTCGACCTC GATGCACTCG CCAGAGGATT GGGGGCGCCG
GTTGTGCCGC TCGTTGCCAG CAAGGGAGAA GGGCTGGCGG CGCTGAAGGC GGCGCTGACG
ACGCTGCTCT CCGGGGTTGA TGTTCGTCGG ATCGCACGAA AGGTGGCATG A
|
|---|
| Protein sequence | MSEAIVALAG NPNVGKSTIF NALTGLRQHV GNWPGKTVER KEGQLLLDGR VVTIVDLPGA
YSLASRSLEE QIARDFIVRD RPDLVINVVD AANLERNLYL TVQLLETGVP LLVALNMTDV
AAARGMTLDL DALARGLGAP VVPLVASKGE GLAALKAALT TLLSGVDVRR IARKVA
|
|---|
| |