Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4249 |
Symbol | |
ID | 5541760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5491582 |
End bp | 5492394 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640896356 |
Product | deoxyribodipyrimidine photolyase-like protein |
Protein accession | YP_001434294 |
Protein GI | 156744165 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCG ATATGCGCCG TGATTTCGCC AACCGCAATG AGTTGATCGA GTATCTGCGC CGCGAGTTTC CGCAGGCGGC GGCGCGCTGT GACGAGGTGA GCGCGACCCG TGGCGGGAGG CGGGAGGCGG AGACGCGCCT GCGACGTATC GACCCGCGTC GCTACGCCGC CACGCGCAAC TACCTGAGTG GTGCAGTCAC GCATCTTTCG CCCTACATCC GGCATGGCGT TCTCAGTCTG GCGGAGGTGC GCGATGCGGC ACTCAGCCGG GTGCGTCGCT CTGCCGATGC CGCCAAACTG GTCAGCGAAC TCGGTTGGCG CGATTACTGG CAGCGCCTCT ACGAACGCCT CGGTGACAAT GTCTGGCGTG ACCAGGAGTC ATACAAGACC GGTTATTGCG CCGGTGACTA CGCCGCCGAA CTGCCGGACG ACATTATCGA AGGGCGCACG GGGCTGGCGT GCATCGACGC ATTCAGCCAC GAATTGCGCG CCACCGGTTA CCTGCACAAC CACGCGCGCA TGTGGCTGGC GGCGTATGTG GTACACTGGC GACGTATCAG ATGGCAGGCG GGCGCGCGCT GGTTTCTTGA ACATCTGCTC GACGGCGACC CGGCGAGTAA CAATCTGTCG TGGCAGTGGG TGGCGAGCAC CTTCAGCCAC AAGCCGTACA TCTTCAACCG CGAAAACCTG GAGCGCTTCA CCGATGGCGT CTACTGCCGC ACTTGCCCGC TCTACGGGCG CTGCGACTTC GAGGGAACCT ACGATGCGCT GAACCGGCGC CTCTTTCCGA ACGCAACCGG TACGACCGGA TAA
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Protein sequence | MSTDMRRDFA NRNELIEYLR REFPQAAARC DEVSATRGGR REAETRLRRI DPRRYAATRN YLSGAVTHLS PYIRHGVLSL AEVRDAALSR VRRSADAAKL VSELGWRDYW QRLYERLGDN VWRDQESYKT GYCAGDYAAE LPDDIIEGRT GLACIDAFSH ELRATGYLHN HARMWLAAYV VHWRRIRWQA GARWFLEHLL DGDPASNNLS WQWVASTFSH KPYIFNRENL ERFTDGVYCR TCPLYGRCDF EGTYDALNRR LFPNATGTTG
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