Gene Rcas_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4228 
Symbol 
ID5541739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5469867 
End bp5470247 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content62% 
IMG OID640896335 
Productresponse regulator receiver protein 
Protein accessionYP_001434273 
Protein GI156744144 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.987828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACCA TCCTGCTGGT TGACGACGAC CCTAACATCC GCCGCGGGCT GAGAATGAAT 
CTCGCGCTCG AACCCGATTT CGCCGTCGTG GGCGAAGCGG GTGATGGCTG GGACGCCCTG
CGGCTGGCGC GCGAACTCCA GCCCGACGCG GTGGTGATGG ATATCCGCCT GCCTTCGCTC
GACGGCTTGA GCGCGGCGGA GCGCTTGCGG CAATCACAAC TGCGCTGCGC CGTCATCATC
CTGACATTGT ACGATGAGCC GTCCAACCGC GCCCGCGCCC GACAGATTGG CGTGGCGGCG
TTTCTTTCCA AGAGCGCATC GGCGGATGCG TTGAAACAGA CCCTCCGCAA CATCACTTTC
GACAAAGGAG CGCAAACATG A
 
Protein sequence
MITILLVDDD PNIRRGLRMN LALEPDFAVV GEAGDGWDAL RLARELQPDA VVMDIRLPSL 
DGLSAAERLR QSQLRCAVII LTLYDEPSNR ARARQIGVAA FLSKSASADA LKQTLRNITF
DKGAQT