| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4209 |
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| Symbol | |
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| ID | 5541720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5444002 |
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| End bp | 5445510 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896316 |
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| Product | TPR repeat-containing CheR-type MCP methyltransferase |
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| Protein accession | YP_001434254 |
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| Protein GI | 156744125 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.135133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0700485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACGA ATGGTATGAA TATGGCGCAC GATCTCTTCG TTCCTCCGCC AGTGCGTCTG
TCGCCGGAGG CGTTCGACCG GCTACGCACC CTGCTGGCAG ATTATAGCGG CGTCTACCTG
GATACGGCGC AGCAGCGCGT GCTGGAAGCG GGTCTGGCGC AGCGTGTGGC AGCGCTTGGC
GAGACCCTCG AGTCCTATGA GCGCCACATC AGCGCACCGG CCGGTCGCAA CGAACTCCAC
CGTCTGGCAG AGATGGTGGT CAACCACGAG ACCTTTTTCT TTCGCAATGC ACCGCAGATG
CGCGCACTGC GCGAGACATT GCTCTTTGAA TTGCACCGTC GCAAGCCGCC GGGCGAGCCG
ATCCGCATCT GGAGCGCCGG TTGCGCAACC GGCGAAGAGG CGTATTCCCT GGCGATCACG
GTGCTGGAAA CGTTCGGTCT GGCACTGATA CGTCCGGTTG AAATCTGGGC AACCGATCTG
AGCGAACTGG CGCTCGAAAA GGCGCGGACC GGATTCTACC GGGGGCGCTC GCTCAACAAT
GTGACGCCAA TGCTGCTCAA TCGCTACTTC GTGCGGCACG GCGACGGATT TCTCGTGTCG
GACGCTGTGC GGGCGCTGGT GCGTTTCGAG CAACTGAATC TCCTCGAAAC GTTTCCGCCG
ACGGCGTATG GCGTCGACGC AATTTTCTGC CAGAATGTGA CGATCTATTT TCGTCCGGAG
ACGCGGCGTT CATTGATCGA ACGATTTCAT CGCTGCCTGC CGGTCCACGG GCTGCTCTTC
CTGGGATTTT CAGAAACGTT GTGGAATGTG TTCGATGGTT TTCGTTCACG CGAAGTATCG
GGGGCGTATG TCTACCAGAA GGTCAATCCG CCCGACCGAC CGACTCAGCA TCGCAGCACT
TCACCTCGAC CATCGCTACC AACAGAGACC CGACGACGTT CACCGTCCGT CGTCAAAGTC
GCATCCACCC CTTCTCGAAA GGCGCGACCG CCTGTTGCTG CGACAACCGC GCCAACTATG
GAAGAGGATG TCGGTCGTGT GGAACAGGCG CAAGCCCTGA TCGACGCCGG CAGGATCGAC
GAAGCGATGG ACCTGCTGCG CAGCATTCAC CCCAACTCGT CGCTGGCGCC GCGCGCGCTG
GTGCTGGTGG CGCGCGTGCA TGCCGATCGC GGCGAACTCG ACCTGGCCAT TGCTGAAGCG
CGCCGCGCGC TCGAAATCGA TGCATTGCGC AGTGACGCCT ATCTTCTCAT CGGAACGATC
TATGCCCGCC AGGGTCAGGG AAACGAGGCG ATCCAGGCGC TCGAACGAGC GCGCTACCTG
GACCCCGACG CCGCGTTGGT TTCCTATCAC CTGGCACTGG CATACCGTCA GGCGGGCAGG
CAGGAACAGG CGATGCGCGA GTTTCGCAGT GCGCTGAGCA AACTGGCCAG GCACCGGTCC
GAGGATCTCA TCGAAGGCGT CGAAGTCGGT TGGTTGCGCA CCACATGTGA GCAACACCTG
GGCATGTAA
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| Protein sequence | MRTNGMNMAH DLFVPPPVRL SPEAFDRLRT LLADYSGVYL DTAQQRVLEA GLAQRVAALG
ETLESYERHI SAPAGRNELH RLAEMVVNHE TFFFRNAPQM RALRETLLFE LHRRKPPGEP
IRIWSAGCAT GEEAYSLAIT VLETFGLALI RPVEIWATDL SELALEKART GFYRGRSLNN
VTPMLLNRYF VRHGDGFLVS DAVRALVRFE QLNLLETFPP TAYGVDAIFC QNVTIYFRPE
TRRSLIERFH RCLPVHGLLF LGFSETLWNV FDGFRSREVS GAYVYQKVNP PDRPTQHRST
SPRPSLPTET RRRSPSVVKV ASTPSRKARP PVAATTAPTM EEDVGRVEQA QALIDAGRID
EAMDLLRSIH PNSSLAPRAL VLVARVHADR GELDLAIAEA RRALEIDALR SDAYLLIGTI
YARQGQGNEA IQALERARYL DPDAALVSYH LALAYRQAGR QEQAMREFRS ALSKLARHRS
EDLIEGVEVG WLRTTCEQHL GM
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