Gene Rcas_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4048 
Symbol 
ID5541559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5253533 
End bp5253904 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID640896161 
Producthypothetical protein 
Protein accessionYP_001434099 
Protein GI156743970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.726239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0346134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC GCCTGGTAAC AGCGGATGAG TTGCTCCGCA TTCCCACCGA TGGGTTCCGG 
TACGAACTCC TCCTGGGAGA ACTGCGCCGT GTGTCGCCTG CCGGATATCA ACACGGACGC
CTGGTGATGA ACGTTGCCAC GCTGCTTGAT CAGTTTGTCC GCACGCACAG GTTGGGAACA
GTGTGTGCTG CGAAGACGGG ATTTCTTCTG CATGAAAACC CCGACACCGC GCGTGCAGCC
GATGTCGCAT TCATTCGCCG TGAACGGACG CTCGATGCGC GGGATGTCAC TGGATACTGG
CCCGGTGCGC CGATCTCGTG GTGGAGGTGG TGTCACCACA CGACCTCTAT GCCGACGTGG
ATGAAAAGGT GA
 
Protein sequence
MTRRLVTADE LLRIPTDGFR YELLLGELRR VSPAGYQHGR LVMNVATLLD QFVRTHRLGT 
VCAAKTGFLL HENPDTARAA DVAFIRRERT LDARDVTGYW PGAPISWWRW CHHTTSMPTW
MKR