| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3960 |
|---|
| Symbol | |
|---|
| ID | 5541466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 5166899 |
|---|
| End bp | 5167213 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640896068 |
|---|
| Product | DNA polymerase beta subunit |
|---|
| Protein accession | YP_001434011 |
|---|
| Protein GI | 156743882 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1669] Predicted nucleotidyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.886641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.332553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAC AGATCGATCT GCCACGAGAA GCGATTGCCG ACTTCTGCCA TCGCTGGCGC
GTTGTGGAAT TTGCAATCTT CGGATCGGCG CTGCGCGACG ATTTCCGTCC AGATAGCGAT
GTGGACATCC TGGTAACATT CGAACCAGGC GTGCAGTGGA CATTTCAGCA GTGGTTGGCG
ATGGTGCGCG AACTGGAGGA GATATTTGGT CGCAAGGTGG ATCTGGTTGA GCGGTCGCTG
GTTGAACAAA GTGAGAACTA TATTCGTCGA AAACATATCT TAAGTCACCT GGAACGCGTC
TATGTGGCGA GATGA
|
|---|
| Protein sequence | MPLQIDLPRE AIADFCHRWR VVEFAIFGSA LRDDFRPDSD VDILVTFEPG VQWTFQQWLA
MVRELEEIFG RKVDLVERSL VEQSENYIRR KHILSHLERV YVAR
|
|---|
| |