Gene Rcas_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3958 
SymbolhisB 
ID5541464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5165274 
End bp5165864 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID640896066 
Productimidazoleglycerol-phosphate dehydratase 
Protein accessionYP_001434009 
Protein GI156743880 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.160905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCG CGGCAACGAT CGAACGGCAA ACGGGCGAAA CCAATGTGGC GCTGATGCTG 
AACATCGACG GTTCGGGCAG GGTCGATATT GCTACCGGCA TTGGGTTCCT CGATCATATG
CTTCACCTGT TTGCACGTCA CGGTCTGTTC GATCTGGCGG TCCGCGCTGA CGGTGATCTC
CACGTCGATG AGCACCATAC GGCAGAGGAT GTCTGCATCT GCCTGGGGCA GGCATTCGAT
CGAGCGCTTG GCGAGCGCCG TGGGTTGGTA CGCACGGCGC ATGCGTATGT GCCCATGGAT
GAGGCGCTTG GATTCGTTGC GGTCGATCTG AGTGGACGAC CGTACTGTGT AGTCGATGCG
GCATTTGTGA CACCGCGCGT CGGTCGGCTT GGCACCGATC TGATTGCCCA TCTGTTTGAG
AGTATTGCCG TCCACGGGCG CATGAATCTG CACGCGCGCG TCCTGTATGG GCGCAATGAC
CATCATAAAG TCGAAGCGTT GTTCAAGGCG CTCGGTCGCG CGCTCGATGC AGCGACGCGC
ATCGATGAGC GGCTTGGCGG CGTTGTTCCC AGCACGAAGG GGGTCCTATG A
 
Protein sequence
MQRAATIERQ TGETNVALML NIDGSGRVDI ATGIGFLDHM LHLFARHGLF DLAVRADGDL 
HVDEHHTAED VCICLGQAFD RALGERRGLV RTAHAYVPMD EALGFVAVDL SGRPYCVVDA
AFVTPRVGRL GTDLIAHLFE SIAVHGRMNL HARVLYGRND HHKVEALFKA LGRALDAATR
IDERLGGVVP STKGVL