| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3951 |
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| Symbol | |
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| ID | 5541457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 5156854 |
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| End bp | 5157756 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640896059 |
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| Product | ABC transporter related |
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| Protein accession | YP_001434002 |
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| Protein GI | 156743873 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.445411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGG TCATTCGCAC CGAAGAATTG ACCAAGCGGT TTGGCGATCG CGTCGCGGTC
GATCGCATTA ATCTCGAAAT TCGTCCCGGC GAGATTTTTG GTTTCCTTGG TCCGAATGGT
GCAGGGAAAA CGACGACGAT CGGGATGCTC TTGGGGCTGA TTCGTCCCAC GTCAGGTCGG
GCATTCGTGC TCGGATACGA CATTCAGCGT GAGGCGGCAG CCGCGCTCCG TGAGGTAGGC
GCGATGATCG AAGCGCCGGC GTTTTATCCT TATCTCTCCG GGCGCGATAA TCTCCGGGTG
CTGGCGCGCG CCGCCGGTCT TCCCGACCGT CGCGTCGATG AGGCGCTGGC GCAAGTCGAT
CTGACGGCTC GGGGACGTGA TCGCTTCAGT GCATACTCCC AGGGCATGAA GCAACGGTTG
GGGATTGCTG CGGCGCTCCT GCACGAACCA CGCCTGATTA TGCTCGATGA ACCAACCAAT
GGTCTCGATC CCGCCGGGCA ACTCGAGATT CGCAATCTGG TGCGCTCGCT GTCGGGCAGT
GGGCGCACGG TGTTCCTGTG CAGTCATCTG CTCCACGAGG TCGAGCAGGT CTGCCAGCGC
GTCGCTATTC TCAAGCAGGG GCGCATTATT GCCCAGGGTG ATGTGGCATC CCTGTTGCGG
CGCGGCGTGC TGGTGCGCAC GATCGGTGAA CGTGAGCGGG CGGAAGCGAT TCTCCGTTCG
ACGCCATGGG TTTCGCGCAT CAGCACGTAT GGCGACGCAT TCCTGATCGA CGCGCCGGGT
GATCGTACTG CCGATCTCAA TGCACTGTTG ACCGCTGGCG GCGTGCCGGT GGCGGAAATT
CGTCATTACG AAACCAGTCT GGAAGAGTTC TTCCTCGAAG TGACCGCTGA GCGTGAACGG
TGA
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| Protein sequence | MDAVIRTEEL TKRFGDRVAV DRINLEIRPG EIFGFLGPNG AGKTTTIGML LGLIRPTSGR
AFVLGYDIQR EAAAALREVG AMIEAPAFYP YLSGRDNLRV LARAAGLPDR RVDEALAQVD
LTARGRDRFS AYSQGMKQRL GIAAALLHEP RLIMLDEPTN GLDPAGQLEI RNLVRSLSGS
GRTVFLCSHL LHEVEQVCQR VAILKQGRII AQGDVASLLR RGVLVRTIGE RERAEAILRS
TPWVSRISTY GDAFLIDAPG DRTADLNALL TAGGVPVAEI RHYETSLEEF FLEVTAERER
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