Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3936 |
Symbol | |
ID | 5541442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5136757 |
End bp | 5137305 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640896044 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001433987 |
Protein GI | 156743858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.572414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.835095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTG CCCCTCCCCA GGTTCCTTTT AACGCCACGC TGCGCGACGG ACGAGCGGTA CACATCCGCA TGATCGAAGC AGGAGACAAC GAGCGGCTGA TTGCCTTTGG CGCTGCACTG CCCGAAAACG ACTGGCTGCA CGCCGAGAAC GACCTGCGCA GCCCGGAAGT GGTGGCGCGC CTGGTCAATG CGCGCGATGC CGAGCACTGG CGACAGATCG TCGCCGTCGC ACCCGATGGC GCCATTGTAG CCTATGCATC GGCGCGCCAG TTGCCAGGTC GTTCGAGCCA CGTGGCCGAC ATTCAATTGA TTGTGGACAA AGCCTGGCGA CGCTGCGGGC TTGGCTCCGT CATGGCAGGT GAAATCGTCG CCCATGCGCG CAAACTGGGG GTAGACAAAG TGTTCGTCGA TATGGTCGAG GAACAAACAG CCGGCCAGGC CATTTTTACA CGCCTGGGTT TCAAACTCGA AGGGCGTCTC ATCAATCACA TCCGGGACCG CCAGGGGAAA CCGCACAATC TAGTCGTACT GGCCCATCAT GTTGAATGA
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Protein sequence | MTTAPPQVPF NATLRDGRAV HIRMIEAGDN ERLIAFGAAL PENDWLHAEN DLRSPEVVAR LVNARDAEHW RQIVAVAPDG AIVAYASARQ LPGRSSHVAD IQLIVDKAWR RCGLGSVMAG EIVAHARKLG VDKVFVDMVE EQTAGQAIFT RLGFKLEGRL INHIRDRQGK PHNLVVLAHH VE
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