Gene Rcas_3928 details

Gene Information

• Locus tag: Rcas_3928
• Symbol: frr
• ID: 5541434
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Roseiflexus castenholzii DSM 13941
• Kingdom: Bacteria
• Replicon accession: NC_009767
• Strand: +
• Start bp: 5125922
• End bp: 5126479
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640896036
• Product: ribosome recycling factor
• Protein accession: YP_001433979
• Protein GI: 156743850
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0233] Ribosome recycling factor
• TIGRFAM ID: [TIGR00496] ribosome recycling factor

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.887062
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.119713
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCAACG ACGTCCTGCG TGAGGCTGAA AGCCGCATGA AGAAAGCAAC TGAGGCGCTG 
CGCAACCATC TGGCGACGAT TCGCACGGGG CGGGCGTCGC CGGCGCTGGT CGAGCATCTG 
CACGTCGAAG CATATGGCGC GACGCTGCCG CTCAATCAGC TGGCCACCAT CACCGTGCCT 
GAGCCGCGCA TGTTGGTGAT CCAGCCGTTC GATGCCAATA CGGTCAAGGC GATTTCCAAA 
GCGATTATGA ACTCTGAACT CGGGATTACA CCGACGGACG ATGGCCGCCT GATCCGTCTG 
GCGATCCCGC AGTTGACGGA AGCGCGGCGC AAGGAGTTGA CGAAACTGGT GCGCGCGCGC 
GTTGAAGAGT CGAAGGTGGC GCTGCGCAAC ATTCGTCGTG AGGCGCTCGA AGATTTGCGC 
GACCTGGAGC ACGAGAAGAT GATCTCGGAG GACGAGCATC GCCGTGCTCA GGAGAAGCTG 
CAAGAATTGA CCGATCGCTA TGTGCGAGAA CTCGATCACA TTGGCGCCAC CAAAGAAGCC 
GAAGTGATGG AAATCTGA 

 

Protein sequence

MVNDVLREAE SRMKKATEAL RNHLATIRTG RASPALVEHL HVEAYGATLP LNQLATITVP 
EPRMLVIQPF DANTVKAISK AIMNSELGIT PTDDGRLIRL AIPQLTEARR KELTKLVRAR 
VEESKVALRN IRREALEDLR DLEHEKMISE DEHRRAQEKL QELTDRYVRE LDHIGATKEA 
EVMEI