| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3904 |
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| Symbol | |
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| ID | 5541410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5107571 |
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| End bp | 5107846 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640896015 |
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| Product | ribosomal protein L28 |
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| Protein accession | YP_001433958 |
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| Protein GI | 156743829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000260959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.15188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGT GTGATCTTAC CGGCAAAAAA GTCGCTTTTG GGCGCAACAT TCGCCACAAG
GCGTCAGGGG GATGGGCGCG CCGCGCGCCA AAAACCAACC GCACGTTTCG TCCGAATGTT
CATCGTCATA CCATCTATGT GCCCGAGATT GGGCAGAGCG TGACCCTCAA TCTCTCGACG
AAGGCGCTCA GGATTATCAA CAAAAAGGGG TTGCTGGCGG CTGTCCGCGA TCAGAGGCTG
TCGGTCGAAG CGTTTCTCAA GGAGCACACA CGATGA
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| Protein sequence | MAKCDLTGKK VAFGRNIRHK ASGGWARRAP KTNRTFRPNV HRHTIYVPEI GQSVTLNLST
KALRIINKKG LLAAVRDQRL SVEAFLKEHT R
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